Actinotignum urinale: CJ184_005305
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Entry
CJ184_005305 CDS
T09101
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
auu
Actinotignum urinale
Pathway
auu03030
DNA replication
auu03430
Mismatch repair
auu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
auu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJ184_005305
03430 Mismatch repair
CJ184_005305
03440 Homologous recombination
CJ184_005305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
auu03032
]
CJ184_005305
03400 DNA repair and recombination proteins [BR:
auu03400
]
CJ184_005305
Enzymes [BR:
auu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJ184_005305
DNA replication proteins [BR:
auu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CJ184_005305
DNA repair and recombination proteins [BR:
auu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CJ184_005305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
PTCB-BRCT
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WIK58681
LinkDB
All DBs
Position
1275525..1276478
Genome browser
AA seq
317 aa
AA seq
DB search
MREFISFDFETANENRHSACAIGLVHFGVDGEIADRISTLLRPHPDFGFFSPFNISIHGI
TPEQVVDAPTWDEVFTSISRFIGNLPIVAHNLAFDGHVLNKINSLYGKPFVNNRRFCTVR
IARKLLNREEIGKMSLDNIARHILPGASFEHHNALDDAIMCGKIFQYFQEMHPFETIEEL
CQPVSDSFEFGKPKQMRGVRDKGSELAGLGEKKVQSFEKLASGYTDRSILCGENVVFTGT
LERGIRTDMQKLVEHLGGEAGKSITKKTTILVVGMLDTSRFVHGENISSKMKKAISLREA
GSPIEVISEDEFFNRLV
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtttatttcgtttgattttgaaacagctaacgagaaccgtcattccgcctgc
gcaataggattagtgcattttggagtcgatggtgagattgcagatcggatttctaccctt
ttgcgccctcatcctgactttggattcttcagcccatttaacatttcaattcacggtatt
acaccagaacaagttgtagacgcacccacctgggatgaagttttcacatctatctcacgt
ttcataggaaatttaccaattgttgcgcataacctcgcctttgatggacatgtgctcaat
aaaattaactcactttacggaaaaccctttgtgaataaccgacggttttgtaccgtgcga
attgcgcgaaaacttttgaacagggaagaaattgggaaaatgtcactcgataatatagct
cgacatatcctaccgggtgcttcctttgaacatcacaacgcgcttgatgatgcgataatg
tgtggcaaaatatttcaatattttcaagagatgcacccctttgaaactatcgaagaactg
tgtcaaccagtaagtgattcttttgaatttggtaaaccaaaacaaatgcgtggagtacgc
gacaaaggtagcgagttagccggacttggtgagaaaaaagttcaaagttttgagaaatta
gcgtctgggtatacagatcgttcaatactctgtggtgagaatgtggtattcaccggcact
cttgaacgtggaattcgtacagatatgcagaagctggtagaacatcttggaggggaagca
ggaaaatcgataactaagaaaactacaatcttagttgttggaatgcttgacacaagtcgc
tttgtgcatggtgaaaatatttcttcaaagatgaagaaggccataagtttacgtgaagct
ggatctcccatagaagttattagtgaggacgagttctttaaccgtcttgtgtaa
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