Alteromonas ulvae: ACOJR9_01330
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Entry
ACOJR9_01330 CDS
T11410
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
auv Alteromonas ulvae
Pathway
auv03420
Nucleotide excision repair
auv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
auv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACOJR9_01330 (uvrD)
03430 Mismatch repair
ACOJR9_01330 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
auv03400
]
ACOJR9_01330 (uvrD)
Enzymes [BR:
auv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACOJR9_01330 (uvrD)
DNA repair and recombination proteins [BR:
auv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACOJR9_01330 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ACOJR9_01330 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XQN00794
LinkDB
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Position
complement(314898..317069)
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSRLLDELNDKQREAVAAPLSNALVLAGAGSGKTRVLVHRIAWLMEVENIAPFSILAV
TFTNKAAKEMRGRIESLMGKSLHNMWIGTFHGLAHRLLRAHHAEARLPENFQIIDSDDQY
RLIRRMLKAMNLDEKHYPPRQIQWYINGNKDEGLRPQHIETFDDPIQKTMREVYTAYQDA
CDRSGLVDFAELLLRAHELWAKNPDVLAHYQRRFRAVLVDEFQDTNNIQYAWLRMLSSGD
NNNIMIVGDDDQSIYGWRGANVDNIQHFLKDFESPATIRLEQNYRSTGNILKAANTVIDN
NTGRLGKELWTEDSQGEPISVYAGFNELDEARFIVSKIKDWLNQGNALSDTAILYRNNAQ
SRVLEEALLHEGLAYRIYGGLRFFERQEIRDALGYLRMVSHPHDDAAFERVVNTPSRGIG
EKTLSQVRETARTHNCSMWQASQLLINEASLKGRALNAIQSFVLLVTELEQSTIDDSLDQ
QADKAIRQSGLYAMYQSERGEKAQARLENLEELVTACKTFIMPDEAEEMTPLAAFLAHAS
LEAGDTQADKDQDAVQMMTIHTAKGLEFPLVFLAGVEEGMFPSQMTNDEPGRMEEERRLC
YVGMTRAMQKLYITYAESRRLYGQDKYHTASRFIREMPEDCIEEVRLKSTISRPVHNRFN
QMTSHASFEETGFKLGERVVHRKFGEGIVLNYEGSGEHARVQVNFDEFGSKWLVLAYAKL
DKA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatccagactgctagacgagcttaacgacaaacaacgtgaggctgtagcagca
ccgctctcaaatgcgctggtattagcaggcgctggtagtggcaaaacccgcgtactcgtt
caccgtatagcgtggttaatggaagtcgaaaatattgcacccttctcaatcttagccgtt
acgttcacaaataaagccgctaaagagatgcgcggtcgtatagagtcgctcatgggcaaa
agcctgcataacatgtggattggcacgttccacggtttagcccatcgcttgttgcgcgct
caccacgctgaagcacgactgccagagaattttcaaatcattgattcagacgatcagtat
cgcttgattcgtcgaatgttaaaggccatgaatttagacgagaagcactatccccctcgc
caaattcaatggtatatcaacggtaacaaagacgaaggtctgcgccctcagcatattgaa
acctttgacgaccctattcaaaaaaccatgcgcgaagtgtataccgcttatcaagatgcc
tgcgatcgctcaggccttgtagactttgctgaattactgctacgcgctcatgaactgtgg
gcgaaaaaccctgacgtattagcccactaccagcgtcgttttcgcgcggtgttagtggac
gaatttcaagataccaacaacattcaatatgcttggttacgcatgctgagcagcggtgat
aataacaatattatgattgtgggtgatgacgaccagtctatatacggttggcggggcgca
aatgtagacaacattcagcactttttaaaagactttgaatcgccagcaaccattcgccta
gagcaaaactatcgctccacgggcaacatactgaaagcggccaataccgttatcgataac
aacacaggtcgtttgggtaaagagctttggactgaagatagtcaaggtgagcccatctcg
gtgtatgccggctttaacgagcttgatgaagcccgctttattgtgtcgaagataaaagac
tggctgaaccaaggcaatgcccttagcgataccgccattttataccgaaacaatgctcaa
tctcgtgttttagaagaagcgttgctacacgaagggctggcatatcgcatttacggtggc
ctgcggttcttcgagcgtcaagaaataagagatgcccttggttacctgcgcatggttagt
catccccacgacgatgccgccttcgagcgcgtggtgaatacaccgagtcgtggcatcggc
gaaaaaaccctgtctcaggtgcgcgaaaccgcgcgaacgcacaactgctctatgtggcag
gctagccaactgctgattaacgaagcaagcttaaaaggtcgcgcgctaaacgcaatacaa
agttttgtattattagtgacagaattggaacagtcgacgattgatgattcactagatcaa
caggcagacaaagctattcgccagtctgggctatacgctatgtaccagtctgagcgcgga
gaaaaagcgcaagcccgtttagagaacttggaagagctggttacggcgtgtaaaaccttc
attatgcccgatgaggcagaggaaatgacgcctctggcggcctttttagctcacgcctca
cttgaggccggtgacacccaagccgataaagatcaagatgccgtgcaaatgatgactatc
cataccgcaaaaggtttagaattccctttggtatttttggccggtgttgaagaaggcatg
ttcccaagccaaatgaccaatgatgagcctggacgaatggaagaagagcgtcgtctctgc
tatgttggaatgacgcgggctatgcaaaagttgtatatcacttatgcagaaagtcgtaga
ttatatggtcaagacaaataccacaccgcgtcgcgctttatccgcgaaatgccggaagac
tgcattgaagaagtgcggctaaaatcgactatttcgcgtcctgtgcacaaccgatttaat
cagatgacgtcgcatgcgtcatttgaagaaactgggtttaagttgggcgaacgggtagtg
caccgaaagtttggtgaaggtattgtgctaaattatgaaggtagtggcgaacacgctcgc
gtgcaggtaaactttgatgagtttggcagtaaatggttagttctcgcctacgcaaaattg
gataaagcgtag
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