Alteromonas ulvae: ACOJR9_08120
Help
Entry
ACOJR9_08120 CDS
T11410
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
auv Alteromonas ulvae
Pathway
auv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
auv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACOJR9_08120 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
auv03400
]
ACOJR9_08120 (xthA)
Enzymes [BR:
auv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ACOJR9_08120 (xthA)
DNA repair and recombination proteins [BR:
auv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ACOJR9_08120 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
baeRF_family6
Motif
Other DBs
NCBI-ProteinID:
XQN02018
LinkDB
All DBs
Position
complement(1857787..1858593)
Genome browser
AA seq
268 aa
AA seq
DB search
MKVVSFNINGIRARLHQLQALIDAHQPDVIGLQEIKVHDEQFPVKAVEDMGYEVFFHGQK
SHYGVAFLAKKSPTSVIKGFPTDDEDAQRRMIILKTTDDAGDPVTILNGYFPQGENQKHE
TKYPAKKKYYQDLMTYLNDNHTPDEKVIVMGDVNVSHTDLDIGIGEENKKRWLKTGKCSF
LPEEREWLNTLMSWGFEDSYRSLNPQKDDEYSWFDYRSKGFNDNRGLRIDLILATPSLHS
ALKDAGIDYKLRGIEKPSDHAPIWATYE
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgtatcgtttaacataaatgggatccgtgcccgtcttcaccagctacaggca
ttgatagatgcccaccagcctgacgttattggtttacaggaaataaaggttcacgacgaa
cagtttcctgtgaaagctgttgaggatatgggttatgaggtcttttttcatggccaaaaa
agccattatggcgtcgcatttttagcgaaaaagtcgccaacgtctgtcattaaaggcttt
cccactgacgatgaagatgcccaacgccgcatgataattctcaaaaccaccgacgatgca
ggcgaccctgttaccatattaaacggttacttcccgcagggtgaaaatcaaaaacacgag
accaaataccctgccaagaaaaaatattatcaagatttaatgacctaccttaacgacaac
catacgcctgacgaaaaagtgattgttatgggagatgttaacgtgtcgcacaccgactta
gacattggtattggcgaagagaacaaaaagcgctggttaaaaacggggaaatgtagcttt
ttaccagaagaacgtgagtggctaaatacactgatgtcttggggttttgaagacagttac
cgcagtcttaatccacaaaaagatgatgaatattcgtggttcgactaccgttcaaaaggg
tttaacgataaccgcggcctgcgaatagatttgatccttgccacgccttcgttgcacagc
gcactgaaagatgcgggaatagactacaagttaagaggaattgaaaagccctctgatcac
gcccccatttgggcaacctatgagtaa
DBGET
integrated database retrieval system
