Alteromonas ulvae: ACOJR9_11445
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Entry
ACOJR9_11445 CDS
T11410
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
auv Alteromonas ulvae
Pathway
auv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
auv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACOJR9_11445 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
auv03400
]
ACOJR9_11445 (recC)
Enzymes [BR:
auv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACOJR9_11445 (recC)
DNA repair and recombination proteins [BR:
auv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACOJR9_11445 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
XQM99164
LinkDB
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Position
complement(2612798..2616574)
Genome browser
AA seq
1258 aa
AA seq
DB search
MLALYPSNKLEHLSFLLTSLLEQQPSSVFSPETILVESPGMQHWVSMQLAREQGIAMNLD
FPLPVRFMWNTARVVLGSEKVPRQSPYRREVLTWRIDNILQDDALMTTGAFEQVRRYWLS
AGSEQEQGVQRLQLATALADVYEQYLLYRPDWLFAWENNEQVVFDDMESWQSEIWRILTK
EQSLHPARLHKMTIDALSEGLLPPNLPSRIVVFAINTMAPQLIAFFDALAEHIDIHIFHL
NPSVNYWGDAKSDSELAKQLRMEGINKWMENEQSNSLLGNLGKQGRELFNLLTELDTFEI
SAFDAPEIDETEIDALDDATLEETSRESISGEKISSREIGSEETYTEETNLSGTNVAEKP
QNNIAETKSSGRGRAQRNLLKRIHSDILQALPASPIRVNGPQEAEQDDSVTIMCTHSALR
EVQVLHDHLLHWLSQDTTRTPSDILVMCPAIENYAPFVDAVFHRVGTRNQYTNGTIRLPC
SIADRSPMDTEPLIAAFMALLELPDSRFGVADIMDYLQLDSVQKRFNVAQADIDQMMVWL
EQAHIHWGLNGKHKASISEGVTNENTYSWWWGLRRLLMGMLAPDSEMIVDGALTIPDVEG
QSALILGKLVQVVDLLGRFANELTTPRSPKEWAHDLLQLRDACFVSTKDQEQSWDLIAKV
AADLYARCDEADYEHTLSLRQIRELLLNRFSSPDAGNHFMTGQVTVCSMLPMRSIPFKKV
CILGLNDSEFPRKATPLGLDLMAGPKRRIGDRSRRLEDRYLFLEAIVSTRESLYLSYQGN
DVKNNSERQPSLVLAEFLDMLATGYQLDISHYVKHAPLHPFSEAAFTGQLPSYETGWLRL
ADALQKAKSSQPQAEGQELDSVQSASLETKTDAQTGNKHSAIENSKSPDETRLTTMQVAR
AFKDPLEYFSLQRLGVNLSQSFTLLDNSEPFETNGLVRYQVLDAIFSVPSGQQESSHHEL
SSEQVVEFASLRGDIPNNPVAKEELQIWKDGALALTQAMGPHDAVAKNVSFVGKHITFTA
SAFEAADSLVLRSAGKINDIRALSYFMSQLVFCTDSETSTHHGYPLDIYYCDWEKGETKL
MKRRFAPLDAATAENMLLFIEQLYMAILTAPTPLYRSLYSDLVPGKRNSDSKVIVGEIKP
EHYDDIIATLQQSCPTAFAYGFEDHSSDDTKGSQPPPNVTSDKAQQIVERSSELFNSIEA
ERILKNWLQSSGQFNADMANNPYLKWLFPDGISWQSLPHVEGFILFSIVANCAVEEQL
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgcgctatatccatcaaacaaattagagcatcttagttttctgcttacttcgtta
cttgagcaacaaccctcctcggtattttcccctgaaactatccttgttgaaagtcctggt
atgcagcattgggtaagcatgcagttggctcgcgagcagggaattgcaatgaaccttgat
tttcctttgcccgtgaggttcatgtggaatacagccagggtggtgttaggcagtgaaaag
gtacctcgtcagtctccttatcgacgagaggtacttacgtggcgtatagataatattctg
caagacgatgccctgatgaccaccggtgcgtttgaacaagtgcgccgctattggttaagt
gcgggcagtgagcaagagcagggcgttcagcgtttacagctcgctacggcccttgccgat
gtgtatgagcaatacttactgtaccgaccagactggctttttgcctgggaaaataatgag
caggtggtgttcgatgacatggaatcgtggcagagcgaaatttggcgcattctgacaaaa
gagcagtctctgcatcctgctcggcttcacaagatgactatagatgctctcagtgaaggc
ttgttaccaccgaaccttccatctcgcatagtggtttttgctatcaataccatggcgcct
cagctcattgcattttttgatgcgctggccgagcatatcgatattcatatttttcattta
aaccccagtgttaattattggggggatgctaaaagcgacagtgaacttgcgaaacaactg
cgcatggaaggcatcaataagtggatggagaacgagcagagtaattcgttgttaggtaac
ttaggtaagcaaggaagagagttgtttaacttactgaccgagttagacacttttgaaatt
agtgcgtttgatgcccccgagattgatgaaaccgaaattgatgcccttgacgacgccacc
cttgaagaaacaagcagagaatcaataagcggtgaaaaaataagcagtcgagaaataggc
agtgaagaaacatatactgaagagacgaatctttcaggcactaacgtagcggaaaagcct
caaaataatatcgcagaaacgaaaagctcaggcagagggcgtgctcagcgcaatctgcta
aagcgtattcatagcgatatattacaggccctgcctgcaagccctattcgagtaaacggc
cctcaagaagcagagcaagacgacagtgtcactattatgtgcactcactctgcgttgcgt
gaggtgcaggtgctgcacgatcatctattacattggttgtcacaagataccacgcgcacg
ccttccgatattctggtgatgtgccctgctattgaaaattatgcccctttcgtcgacgcc
gtttttcaccgagtaggcactagaaaccagtacaccaatggcaccatccgtttgccatgt
tcaatcgccgacagaagcccaatggataccgagccattgattgccgcttttatggcgctg
ctagaattgccagatagccgctttggcgtggcagatataatggattatttacagctcgat
tctgtgcaaaagcgctttaatgttgcgcaggctgatatcgatcagatgatggtatggctt
gagcaagctcatattcattgggggttaaatggcaagcataaggcctccatatctgagggc
gtgacaaatgaaaatacgtacagctggtggtggggacttcgtcgcttactcatgggcatg
ttagcaccagatagcgaaatgattgttgatggagcgctcaccatacctgacgtagagggc
caaagtgcgcttattttgggcaagctggtacaagttgttgatttacttggccggtttgca
aacgaactcactacaccgcgctcgccgaaagaatgggctcacgatttactgcagctgcgt
gatgcgtgctttgtgtctaccaaagatcaggagcaaagctgggatttaatcgctaaagtg
gccgctgatttatatgcgcgatgcgatgaagctgactacgaacacacgttgagcttacgt
caaattcgggaactattgttaaaccgcttctcttccccagatgccggaaaccattttatg
acggggcaagtaaccgtatgctctatgttacctatgcgcagcattccgtttaagaaggta
tgtattttaggattaaacgatagcgagtttccaagaaaagcgacgccgcttgggcttgat
cttatggcaggaccgaaaaggcgaataggcgataggtcacgaaggctagaagacaggtat
ctttttttagaggcaattgtttctacccgagagagcttgtatttaagttaccaagggaac
gatgtcaaaaataacagtgaacgtcagccaagtttggtgctggcagagtttctcgacatg
ctcgcaacgggctatcagcttgatatctcgcattatgtaaagcacgcgccactacacccc
tttagtgaggccgcatttaccgggcagcttccaagctacgagacgggttggcttcgccta
gcagacgcactgcaaaaagctaaatcttcgcagccacaggctgagggtcaagaattagat
tcagttcaaagcgcttcgttagaaacaaaaacagacgcccagaccggtaataagcatagc
gctatcgaaaacagtaaaagtccggatgaaacacggcttacaaccatgcaggtggcgagg
gcatttaaagaccctttggaatacttttcgctgcagcgcttaggggtaaacctatctcag
tctttcaccttgctagataacagcgagccgtttgaaactaatgggcttgtgcgatatcag
gttctagacgctattttctcagtgccgtcggggcaacaggaaagctcgcatcacgaacta
tcttcagagcaggtggtggaatttgcttctttgcggggcgatattccgaataaccctgtg
gcaaaagaagagctacaaatttggaaagacggagcgctagcattaacccaggcaatgggc
cctcacgatgctgtggcaaaaaacgtcagttttgttggtaagcacattaccttcaccgcc
agcgcttttgaagctgctgatagtctagttctgcgaagcgccggaaaaattaacgacata
agagcactgtcgtactttatgtctcaacttgttttttgcaccgacagtgaaaccagcact
catcatggctatccgttggatatttattattgcgactgggaaaaaggcgaaacaaagttg
atgaaacgtcgcttcgcgccactcgacgctgccactgccgaaaacatgttgttatttatt
gaacagctatacatggcaatactcactgcgccaacgcctctttaccgcagcttatattcc
gacctagtgccaggtaagcgaaattctgacagtaaggtgatagtgggtgagattaagcct
gaacattatgacgatattatcgctacgttacagcaatcatgccctactgcttttgcatat
ggctttgaagatcatagctcggatgatacaaaaggcagccagccaccgcctaatgtcaca
tcagacaaggcacaacaaatcgtcgagcgcagtagcgagctgttcaatagcatagaggcc
gaacgtatacttaaaaactggctgcagtcctcggggcaatttaatgcagacatggccaat
aacccgtatctgaaatggctttttcccgatggtatttcatggcagagccttcctcatgtt
gaaggctttattttgttttccatagtggcgaattgtgcagtggaggaacagctatga
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