Alteromonas ulvae: ACOJR9_12550
Help
Entry
ACOJR9_12550 CDS
T11410
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
auv Alteromonas ulvae
Pathway
auv03030
DNA replication
auv03430
Mismatch repair
auv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
auv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACOJR9_12550 (dnaX)
03430 Mismatch repair
ACOJR9_12550 (dnaX)
03440 Homologous recombination
ACOJR9_12550 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
auv03032
]
ACOJR9_12550 (dnaX)
03400 DNA repair and recombination proteins [BR:
auv03400
]
ACOJR9_12550 (dnaX)
Enzymes [BR:
auv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACOJR9_12550 (dnaX)
DNA replication proteins [BR:
auv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACOJR9_12550 (dnaX)
DNA repair and recombination proteins [BR:
auv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACOJR9_12550 (dnaX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_14
AAA_22
RuvB_N
AAA_2
AAA_5
AAA_18
AAA_16
Rad17
AAA_19
AAA_30
AAA_7
Nup54_a-b
AAA_lid_RFC1
nSTAND3
AAA_assoc_2
TPR_DOCK9
PIF1
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
XQM99368
LinkDB
All DBs
Position
complement(2863226..2866252)
Genome browser
AA seq
1008 aa
AA seq
DB search
MSYQVLARKWRPGKFSELVGQEHVVSAISNALDNDRLHHAYLFTGTRGVGKTTIARIFSK
SLNCEEGQGANPCGQCHTCKEIEQGNYVDLLEIDAASRTKVEDTRELLDNVQYKPTRGRY
KVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPITILSRCLQFNLKAMSR
EQIVGQLTHILEQEQLSFEPQALSLLARAAQGSMRDALSLTDQAIAQGGNQVIASVVTDM
LGLMDKNQLLKIINALINKTPSDVIKLVNDLAEQAPDYDNVHSELASLLHQIALTQWVPE
ACKLETTSAKAIYQLAKTIPAEQVQLLYQIAIQGRKDLPFAADGKSAFEMTLMRMMSFAP
ATPPDNSTDTIERGGSEHDLPVMANPESLTGDPGNVGKQEEAFKSETLADATQKAETAEP
QVQGQPAHNVTSEPDVKPVPELSADAENIANHADIANVDSDSQLRESQPNESQHSESQLS
KSQRQVFEQSEPVQIELKQPKPEKFEPQQLNSSSGASHPPRDLSPFSDDEPPLDAYMDDM
PPASDEEYPSGIDDSFSHHADSEQSGSKDISPDTAQPSPEEQLSATASMLALRQKMKQRK
AQDSEDKKAQISAESPSQDAADRMSNTLRSRFSNATATPSALNNQAQPSQQQIQQEQSDQ
NQFQPQSQMSGIEFSNNEVVTGLSGSANTASDNTSSTIISSPNVPYVQPPVNSDDSGQGN
AFDDDEFFDAEFEEDMPFASDSQPDSQTALSNEGSLQEAASQPGTSQEGASQAHSEDGFF
TEDLPPWETKHSNGSFASNDTVASNNTAARDSLVSANTEQEPLKPVNQTISNQQSDFGQD
SNLQLSAENSPRKDAVGNDLNARSTSQSGSLSAYLEDGTKLTHASQIDEWSNLVEQMPIA
GLLKQLFLHASFSRDNGNVSLEIDNSQSHLLNESAKQQLLDTLHHGLGENVTVNITVGSP
NSTPFALQQDIHAMRQAHAHSVVQTDETIQALLSIFDASVLTDSVKAR
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggtattagcaagaaagtggcgaccagggaagttcagtgagcttgtcggt
caagagcatgtggtgtcagccatttcaaatgccttagataacgatcgtttgcatcatgcc
tatttattcactggcacaagaggcgtaggaaaaacgaccatagcgcgtattttttctaaa
agcctgaattgtgaagaaggccagggagctaacccctgcggacagtgtcatacttgcaaa
gaaattgagcaaggaaattacgttgacttgctagagattgatgcggcttcaagaacgaaa
gtagaagatacgcgtgagcttcttgacaatgtgcagtacaagcccacacgcggccgctac
aaggtgtaccttatagacgaggtacacatgctctcgaaacacagtttcaatgccttgcta
aagacgctagaagagccgccacctcacgtaaagtttctgttggcgacaacggatccacaa
aaactgcctattaccattttatctcgctgtcttcagtttaatctgaaggcaatgtcgcgc
gaacaaatcgttggtcaacttactcacattcttgagcaggagcaattaagcttcgagcca
caagcgctgtcgttgcttgctagagccgcacaaggcagtatgagagatgcgctcagctta
actgatcaggcaattgcacagggcggaaaccaagtaatagcctcggtggttaccgatatg
cttggtttaatggataaaaaccagctcctcaaaataatcaatgcgttgataaataagacg
ccaagtgatgtgattaagttagtcaacgacttggctgagcaggcaccagattacgataat
gtccatagtgaattagcaagtttacttcaccagattgccctgactcaatgggtgccggag
gcatgcaaactagagacaacatcagcaaaagcgatatatcagctcgctaaaaccattcct
gctgaacaagtacagttgctctaccaaattgcaattcagggaagaaaagacctacctttt
gcggccgatggtaagagtgcatttgaaatgacattaatgcgaatgatgtcgttcgctccc
gcaacgcctcctgataatagtactgataccattgaacgcggaggtagtgaacacgatctc
cccgttatggctaaccctgaatcactgactggtgatccgggaaacgtcggtaagcaagag
gaagcgtttaaaagcgaaactcttgcagatgccacacaaaaagcagaaactgcagagccg
caggttcaagggcaacccgctcataatgtaacttctgaaccagatgtaaagcctgtacct
gaactctccgctgatgctgagaatattgccaatcacgccgacatagcaaacgttgactct
gattcgcaactgcgagaatcccagccgaatgagtcccagcatagtgagtcacagcttagt
aagtcacagcggcaagtgtttgagcagtctgaacctgtgcaaattgagctgaaacagccg
aaaccagagaaattcgagccgcaacagttaaactcgagctctggagcttcgcatccgccg
cgtgatttatcgccattttcggatgatgagcctccgttagatgcctacatggatgatatg
ccccctgccagtgatgaagagtatccatcaggtatagatgatagcttttctcaccacgct
gatagtgagcagagcggttcgaaagatatttcgcctgatactgcacaaccctctccagaa
gagcagttaagtgctactgcaagtatgctcgcgcttagacaaaagatgaaacagcgcaag
gcgcaagactcagaagataaaaaagcccagatatctgcagagagtccttcgcaggatgcc
gctgataggatgtctaatactctgcgttctcgattttcaaatgcgaccgcaacgccatca
gcgctgaataaccaagcgcaaccttcgcagcagcaaattcaacaagagcaatcagaccaa
aatcaattccaacctcaatctcaaatgtctgggattgagtttagcaataatgaagtggtt
actggtttatcaggctcagcgaatacagcctctgacaatacaagctctactataataagc
tcgcccaacgtaccatatgttcagccccctgtgaacagcgacgacagcggccaaggtaat
gcattcgatgatgacgagtttttcgatgccgaatttgaagaagatatgccgtttgcgagt
gactcgcagcctgattcgcagaccgctttatcaaacgaaggctcattacaagaagcagcc
tcacagccaggcacatcacaagaaggtgcatcgcaagcgcattctgaagatggctttttt
acagaagatctaccgccgtgggagactaaacatagcaacggttcttttgcttccaatgac
actgtagcttctaataatactgcggcgcgcgactcattagtgagtgcaaatactgaacaa
gagcctttaaagcctgtcaatcagactattagtaatcagcagagcgattttggccaagat
agcaaccttcagctcagtgcagaaaattcgccaagaaaagatgctgtgggcaatgattta
aacgcaagatccacctcacaaagcggtagtttaagtgcatacctcgaagatggaactaaa
cttactcatgctagccaaatagatgagtggagtaacttagttgagcagatgccaattgca
gggcttttaaaacaattgttccttcatgcttctttttctcgagataacggtaatgtgtcc
cttgaaattgacaatagtcagtcgcatctactcaatgagagtgcaaaacagcaattgcta
gacacactgcatcatggactgggagagaacgtaacggtgaatattacggtaggctcacca
aattcaacaccatttgcactgcagcaagatattcatgcgatgcgccaggcgcatgcacat
tcagtagtacaaactgatgaaacgattcaagcgctgctatcaatttttgatgcctcagtg
ctgaccgattcggttaaagctcgatag
DBGET
integrated database retrieval system
