Alteromonas ulvae: ACOJR9_16230
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Entry
ACOJR9_16230 CDS
T11410
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
auv Alteromonas ulvae
Pathway
auv03030
DNA replication
auv03430
Mismatch repair
auv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
auv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACOJR9_16230
03430 Mismatch repair
ACOJR9_16230
03440 Homologous recombination
ACOJR9_16230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
auv03032
]
ACOJR9_16230
03400 DNA repair and recombination proteins [BR:
auv03400
]
ACOJR9_16230
Enzymes [BR:
auv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACOJR9_16230
DNA replication proteins [BR:
auv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACOJR9_16230
DNA repair and recombination proteins [BR:
auv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACOJR9_16230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
DNA_pol_A_exo1
CAF1
Motif
Other DBs
NCBI-ProteinID:
XQN00053
LinkDB
All DBs
Position
complement(3748961..3749653)
Genome browser
AA seq
230 aa
AA seq
DB search
MILQWFKERLTLSAGSSLAKQLSGRYINNTDLLAIDVELTSLDAKTTDITSIGWVTGKGG
KLSLCSCEYFVIKTSAALGQSPVIHGLTHDILAEGESLAVSLEKMMPLLQSSVLVFHNAS
LDLAAINKAFVELSLPAVDVTYIDTLKLAVYQLNKQHQVLPTNSATLTVCRQRLDLPSCP
EHNALDDALATIQLLFAQFEQLGLDQSSPLTELLHTKAMGRYRLGATKNR
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgatactgcagtggtttaaagaacgactcacattatcagccggctcgtcgctagcgaag
caacttagcggtagatatatcaataatacagacttactggctattgatgttgagttgacc
tccctcgacgctaaaaccactgatattacgtctattgggtgggtaacaggtaaggggggc
aaactgtcgctgtgctcctgcgagtactttgttatcaaaacatcggctgcgttaggtcaa
agcccggtcattcacgggttaacgcatgatattttggcagaaggagagtctttagctgtc
agtctagaaaaaatgatgccactgcttcaatcgtcagtgctggtgtttcacaatgcgagc
ctggatttagcggcgatcaataaagcatttgtagaactgtctttgcccgctgtagacgtc
acctacattgatacgcttaaactagcggtttatcagttaaataagcaacatcaagtgctt
cctaccaatagcgcaacgcttaccgtgtgccgacagcgattagaccttccaagctgccct
gaacacaacgcccttgacgatgcacttgccacaattcagctattgtttgctcagtttgag
caacttggactagaccaatccagtccgttaactgaacttttgcacaccaaggcaatgggg
aggtaccgattgggggcaacaaagaatagataa
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