KEGG   Aurantimicrobium sp. MWH-Uga1: AURUGA1_00050
Entry
AURUGA1_00050     CDS       T05539                                 
Symbol
hup
Name
(GenBank) DNA-binding protein HB1
  KO
K03530  DNA-binding protein HU-beta
Organism
auw  Aurantimicrobium sp. MWH-Uga1
Brite
KEGG Orthology (KO) [BR:auw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:auw03032]
    AURUGA1_00050 (hup)
   03036 Chromosome and associated proteins [BR:auw03036]
    AURUGA1_00050 (hup)
   03400 DNA repair and recombination proteins [BR:auw03400]
    AURUGA1_00050 (hup)
DNA replication proteins [BR:auw03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    AURUGA1_00050 (hup)
Chromosome and associated proteins [BR:auw03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    AURUGA1_00050 (hup)
DNA repair and recombination proteins [BR:auw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      AURUGA1_00050 (hup)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: AXE53768
UniProt: A0A344W0N1
LinkDB
Position
41394..41672
AA seq 92 aa
MALNKSEVVAAVAAHTNLSQANVNGVIDALFAVVAAEVAKGGKVTIPGFISFERTNRAAR
TGRNPQTGATIQIAASKSVKVSAGSKLKAAVK
NT seq 279 nt   +upstreamnt  +downstreamnt
atggctctcaacaagtctgaggttgtcgcagcagttgccgctcacaccaacctttcacag
gcaaacgtcaacggcgttatcgacgctctcttcgcagttgttgctgctgaagttgctaag
ggtggaaaggtaaccatccctggcttcatctccttcgagcgcaccaaccgtgcagctcgc
accggtcgtaaccctcagaccggcgcaaccatccagatcgcagcttccaagtctgtcaag
gtctcggctggtagcaagctcaaggctgctgtcaagtag

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