Aurantimicrobium sp. MWH-Uga1: AURUGA1_00429
Help
Entry
AURUGA1_00429 CDS
T05539
Symbol
xseA
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
auw
Aurantimicrobium sp. MWH-Uga1
Pathway
auw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
auw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AURUGA1_00429 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
auw03400
]
AURUGA1_00429 (xseA)
Enzymes [BR:
auw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
AURUGA1_00429 (xseA)
DNA repair and recombination proteins [BR:
auw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AURUGA1_00429 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
THF_DHG_CYH
Birna_RdRp_C
Motif
Other DBs
NCBI-ProteinID:
AXE54136
LinkDB
All DBs
Position
complement(402564..403808)
Genome browser
AA seq
414 aa
AA seq
DB search
MVSTSLIGMSEAASTREEPWPIAALTTKLKAYLDRLGLVWVEGEITQWDQRSSGIFGKLK
DLTEDSTMGFTIWSNARTKMPDDIKQGDRVVALVKVDFWKKNGQLGLNVLELRHIGLGDL
LEKLERLRAQLAKEGLFDADRKVPLPFLPQCIGLITGQDSDAEKDVLRNAHLRWPQVEFK
VIHTKVQGDQTVPEVIAAIQKLDADPAVDVIIIARGGGDFQNLLPFSDEKLLRVAAACVT
PLVSAIGHEADAPLLDNVADLRASTPTDAAKRVVPDVSEELARVADAKSRISNKVTSFLS
TELERLESLRSRPVLADSDWIIATRAEEIVRNVQRGSDLVDRALHNAMQETVSLKTQLRA
LSPQQTLDRGYAIAVLADGSVVRSAKDAPAHTEFTLNLAEGVVDAVSNGAPKKK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
gtggtctcgactagcctgataggtatgagtgaggcagcatcgacccgggaagagccgtgg
cccattgctgctttgacgaccaagctcaaggcataccttgaccgcctcggtctggtgtgg
gttgaaggcgagattacccagtgggatcaacgttcttctggaatctttggaaaactcaaa
gacctcaccgaagactccactatgggcttcactatttggtcaaatgcgcgcaccaagatg
cctgatgacatcaaacaaggggaccgtgttgttgccctggtcaaagtggacttctggaaa
aagaatggccagttggggcttaatgttctcgaactgcgccacattggcttaggcgatcta
ctggaaaagttagagcgccttcgcgctcagctggccaaagagggtctttttgacgcagac
cggaaagttccgcttccgttcttgccgcaatgcattggactaatcacaggtcaagactct
gacgcagaaaaagatgttttgcgcaacgctcatttgcgctggcctcaggttgagttcaaa
gtgatccacaccaaagtgcaaggcgaccaaacagttcccgaggttatcgctgcaatccaa
aaactggatgccgaccccgcggttgatgtgatcatcattgcccgcggtggtggcgatttc
caaaacctgttgccgttcagcgatgaaaaacttttgcgggttgcagctgcctgtgtcacc
cccctggtgagcgccattggccatgaagccgatgcgccgctgttagataacgtggcagat
ctgcgcgcctccacccccactgatgcagcgaagcgcgttgttcccgacgtgagtgaggaa
cttgctcgcgttgccgatgcgaagagtcgcatcagcaacaaggtcacaagtttcctttca
actgaactggagcgcctagagagcctgcgttctcggccagtgcttgcggattctgactgg
attattgccactcgggctgaagagattgtgcgcaacgtgcagcgcggttctgaccttgtc
gaccgcgcactccataacgccatgcaagagacggtgtctttgaagactcaactgcgagcg
ctttcgcctcagcagactctggatcgtggctacgccatcgcagttttggccgatggctcc
gtcgtacgcagtgcgaaggacgctccggcacacacagaattcacactgaaccttgccgaa
ggtgtggttgatgctgtctcgaatggtgctccgaaaaagaagtag
DBGET
integrated database retrieval system
