Aurantimicrobium sp. MWH-Uga1: AURUGA1_00512
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Entry
AURUGA1_00512 CDS
T05539
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
Organism
auw
Aurantimicrobium sp. MWH-Uga1
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
HEM4
AAA_19
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AXE54219
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Position
complement(484778..486214)
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AA seq
478 aa
AA seq
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MTFADLNIDADIVEALASRGIVEPFPIQEQTIPLALGGQDIIGQAKTGTGKTFGFGLPII
QRLGTNPGPGVKVLVVVPTRELCVQVAEDMELATSNRETKVVSIYGGKSYEGQVEQLKAG
AQIVVGTPGRLLDLANQRLLNLSEIQEIVLDEADKMLDLGFLADIEKIFSQTPPKRHTML
FSATMPGPIVALARRFMNSPIHIRATDPDEGLTQANIKHVIYRAHNMDKDEVIARILQAE
GRGKTVIFTRTKRAASRLVEELTDRGFPAVAVHGDLNQEQRERGMAQFKSGKKDILIATD
VAARGIDVDDVTHVINHTIPDEDQTYLHRAGRTGRAGKTGTAVTFVDWEDLHKWSLINKA
LEFGQPEPTETYSSSPHLYTDLNIPADAKGRLKSTPPTKTPEGHTGRQRDRESGQKSGGD
RQRRRTNNPPKHVSPEGSHGVAGGAHDGRGDEHHDGNNPSRTRNRTRRRGPGLGSTQG
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtgacttttgcagacttaaatattgacgctgacattgttgaggcgttggcttctagggga
atcgttgaaccattccctattcaagaacaaaccatccctcttgctttgggcggccaagac
attattggccaggcaaaaactggtaccggaaagaccttcggttttggtttgccaattatt
caacgccttggaacgaaccctggccccggcgtgaaggtgctcgttgttgtacccacccgt
gaattgtgtgttcaggtagctgaagacatggaactggccacctccaaccgggaaactaag
gttgtctccatctacggaggcaagtcctatgagggccaggttgaacagctcaaggcaggt
gcccagattgtggtgggaaccccgggacgtttgctcgacctcgccaaccagcgcttgctg
aacctttctgaaattcaagaaatcgttctcgatgaagctgacaagatgctagaccttggt
tttttggcagacatcgagaaaatcttctcgcagacccctcccaagcgtcacaccatgctc
ttctcggcgacgatgcccgggcccatcgtcgccctggctcgtcgattcatgaatagcccc
atccacattcgtgcaactgatccagatgaaggccttacccaagccaacatcaaacacgtc
atctatcgtgcccacaacatggacaaagatgaggttattgcccgcattctgcaggcagaa
ggccgcggcaagaccgtcatcttcactcgcacaaagcgtgcagcctcacgcttggttgaa
gaactgaccgatcgtggcttccccgctgtagcggtgcacggtgacctcaatcaggaacag
cgcgaaaggggcatggctcagttcaagtcaggtaaaaaagacattctgattgctaccgac
gttgccgctcgcggtattgatgtggacgacgtaacccacgtgatcaaccacaccatcccg
gatgaagaccagacctatttgcaccgcgcaggccgtactggccgcgcgggtaaaaccggt
accgctgttacattcgtggactgggaagacctgcacaaatggtcactgattaacaaagct
ctcgagtttggtcaacctgaacccactgagacgtactcgtcgtcaccacacctctacacc
gacctcaacatccctgcagatgcgaagggccgactcaagtccactcctcccaccaagacc
cccgaggggcacaccggtcgccagcgcgatcgtgagagtgggcagaaatctggtggcgat
cgccagcgtcgtcgcaccaataacccgccaaagcacgtcagccctgagggcagtcacggt
gttgccggtggcgcacacgatggtcgtggggatgaacatcatgacggcaacaacccctca
cgcacacgcaatcgcacccgtcgccgcggcccaggtttgggctcaacacagggctga
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