Aurantimicrobium sp. MWH-Uga1: AURUGA1_00539
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Entry
AURUGA1_00539 CDS
T05539
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
auw
Aurantimicrobium sp. MWH-Uga1
Brite
KEGG Orthology (KO) [BR:
auw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
auw03016
]
AURUGA1_00539 (truB)
Enzymes [BR:
auw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AURUGA1_00539 (truB)
Transfer RNA biogenesis [BR:
auw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AURUGA1_00539 (truB)
Prokaryotic type
AURUGA1_00539 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AXE54246
LinkDB
All DBs
Position
511704..512639
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AA seq
311 aa
AA seq
DB search
MASSSTTAPNGILLVDKPQGFTSHDAVARVRRLAGTRKVGHAGTLDPMATGLLIMGLGPS
TRLLTYIVGLSKEYIATIRLGSSSTTDDAEGELLGFAPQAQLNKVTEEDILTGVHSLTGD
IEQIPSSVSAIKVNGKRAYDLARAGESVELKARPVTIHAFEVNNIEFGQDDSGNGFIDVQ
VRVECSSGTYIRALARDLGFKLGVGGHLTALRRTRIGDFHVMDAVDIENMAGAPQLQKPS
DVARRIFPAIDLNETQALELSQGKRVQLDGYPDSAEPVAAIGPQDRLIGLITVKKNLSRV
VVNFPTETESS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcctcgactacagcgcccaacggcatattgttggtcgacaagccacaaggt
ttcaccagtcacgatgcggtagcgcgtgttcgccgcttagccggaacacgcaaggttggt
catgcggggacgttagatcccatggctaccggattgctcatcatggggctggggccctct
actcggcttctgacttatattgtcggtttgagcaaggaatatatagccaccattcgttta
ggttcctccagcactacagatgatgctgaaggagaactcctcggctttgccccgcaggca
cagctgaacaaggtcacagaggaagacatccttaccggagttcactccttgactggtgac
atagaacaaattcccagttcagtcagcgctattaaagtcaatggaaaacgcgcctatgac
ctcgcccgggctggtgaaagtgtcgaactcaaggctcgtccagtcacgatccacgctttc
gaagtcaacaacattgagtttggtcaagatgattcaggcaatggctttatcgatgttcag
gttcgagttgagtgttcctcaggaacgtacattcgtgccctcgcccgtgacttgggattc
aagttgggtgtcggtgggcatctcactgcgttgcgtagaacacgtatcggtgacttccac
gtgatggatgccgtggatattgagaacatggctggtgctcctcagctacagaaaccttcg
gatgttgcacggagaatattccccgcaattgacctgaatgagacccaagctctcgaactg
agccaaggcaaaagagttcaacttgatggttatcccgatagcgctgagccggtcgctgca
ataggcccacaggataggctgattgggctgattacggtgaagaaaaacctctctcgcgtc
gttgtcaatttccccacagaaacggaaagttcctag
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