Aurantimicrobium sp. MWH-Uga1: AURUGA1_00800
Help
Entry
AURUGA1_00800 CDS
T05539
Symbol
hrpB_2
Name
(GenBank) ATP-dependent RNA helicase HrpB
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
auw
Aurantimicrobium sp. MWH-Uga1
Brite
KEGG Orthology (KO) [BR:
auw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
auw03019
]
AURUGA1_00800 (hrpB_2)
Enzymes [BR:
auw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AURUGA1_00800 (hrpB_2)
Messenger RNA biogenesis [BR:
auw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AURUGA1_00800 (hrpB_2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
DUF1844
AAA_25
TPX2
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AXE54490
LinkDB
All DBs
Position
775405..777846
Genome browser
AA seq
813 aa
AA seq
DB search
MVELTAAERYALAQARKKTPLVNEFRERRTFDLDPFQIAAANVLEAGSSVLVAAPTGAGK
TVVAEFAVFLAMSTETDKLFYTTPMKALSNQKYNEFVDEWGASNVGLLTGDTNINPTARI
MVMTTEVLRNMLYADSDLLRNLKFVVMDEIHYLADRFRGAVWEEVIIHLPQHVRLVGLSA
TVSNAEEFGDWLQAVRGNTEIIVSEDRPVPLDQHVLVGNKFIDLFDTARSGANTRVNPEL
LRLAHSHQRAPHIRSAGRNSHRGGRNKPNYAMNAPLQGRMDRAQIIELLAEKNLLPAISF
IFSRAGCDQAVSQVLRSGIRLTTAEEREEIREIVEQRCSPIPDEDLGVLGYWDWIDGLER
GVAAHHAGLLPAFKEVVEELFQKKLVKVVFATETLALGINMPARTVVLEKLEKFNGEARL
PLTPGEYTQLTGRAGRRGIDVEGHSLIQWSNNLDPQTVASLASRRTYPLNSSFRPTYNMA
INLIEQFGRARTRDILESSFAQFQADRAVVDLARKVKQQEETLAGYAEPMTCHLGDFVEY
AALRRKLTDIERQSESGSRAAKEKRSAELNSLRKQLKSHACHHCPDREQHARWAERWWRL
KRETDKIVQQINTRTGAVARIFDRVCDVLVDIDYLMKDPQGSEFSLTPKGEYLGKIYGER
DLLIAESIRLQLWNELDAPSLAAMACAIVFEPRREEGLINERHLPRGKFLDALHETQSLW
ADLDELENYHKLPGTSPLATGLCLAMYKWAKGDRLDNVLFDADMPAGDFVRWAKQTIDLL
DQLAQVTDGELQKTARDSLDQVRRGIVAYSAVV
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggtcgagctcacagctgctgaacgttacgcacttgcacaggcacgcaaaaagacacct
ctagtcaatgaattccgggaacgcagaacttttgacctagacccattccaaatcgctgcg
gcaaacgttcttgaagcgggtagctcagtactagttgctgctccaactggtgcaggcaaa
acagttgttgctgaatttgctgtctttctagcaatgtctactgagactgacaaattgttt
tacacaacgcctatgaaagccttgtcgaaccagaaatacaacgagttcgttgacgagtgg
ggcgcaagtaacgttggcttgctcactggcgacaccaacatcaatcccactgcacgcatc
atggtgatgaccactgaggtcttgagaaatatgctctatgcagacagtgacttactgaga
aacctcaaattcgtggtgatggatgaaattcactaccttgcggatagattccgtggtgcc
gtgtgggaagaagtcattatccatttgcctcaacatgtgcgtcttgttggtttgagtgca
acagtttcaaacgcagaggagttcggagattggctccaagctgtccgcggcaacacagaa
atcattgtttctgaagatcgtcccgtgccgttagaccaacatgtgttggttggaaacaaa
tttattgacctctttgacacagctcggtcaggtgcaaacactcgagttaacccagaactt
ctgaggttggctcattcccatcaacgagcgcctcatattcgttcagcaggtcggaattca
caccgcggcggaagaaataaacccaattatgcgatgaacgcacctcttcaaggccgtatg
gatcgtgcacaaattattgaactacttgccgagaagaatctcctccccgcgatttcattt
attttcagccgagctggttgtgatcaagcagtctcccaggttttgcggtcaggaattcgt
ctgacgacagcagaagaaagagaagaaattcgagaaattgttgaacaacgatgttcacct
attcctgacgaagacttgggtgtattggggtattgggactggattgacggtttggagcgc
ggagtagcggctcaccatgcaggtcttttgcccgcattcaaagaagttgttgaagagtta
tttcaaaagaaattggtcaaagtagtttttgcaaccgaaactcttgcattaggtatcaat
atgcctgctaggactgttgttcttgaaaaacttgagaaattcaacggcgaagcacgactt
cctctgaccccgggtgaatacacacaactgacaggcagggcaggccgtcggggaattgat
gtcgaaggtcactcactgattcagtggtcaaataatttggacccacaaactgtcgcaagt
ttggctagtaggagaacatatccgctgaactcaagctttcgcccaacctacaacatggcc
attaacctgatcgaacaatttggtcgtgcacgaactagggacattctcgaaagcagcttt
gcccagtttcaggcggaccgcgcagtcgttgatttagcaagaaaagtaaagcaacaagaa
gaaacgttagctggttacgcagaaccaatgacctgccatctgggtgattttgttgaatat
gcagcgcttcgccgaaaactgacagatatcgaaaggcaatctgagtcaggttctcgagca
gctaaagaaaaacgaagcgcggaactaaattcccttcgaaagcaattgaagtctcatgcc
tgccatcattgcccagatcgcgaacagcatgcgcgctgggcagagagatggtggagactc
aaacgggagaccgacaaaattgttcaacagatcaacacgcgtaccggcgctgttgctcgt
atttttgatcgagtttgtgatgtattggttgatattgactatttgatgaaagatcctcag
ggtagtgagttctctctgacgcctaaaggagagtatctcggaaagatttacggagagcgt
gatctcctgattgccgagagcattcgtttacagctatggaatgaacttgatgcgccctca
ttggccgcaatggcttgtgcaatagtttttgaaccacgtcgtgaagagggtctgatcaac
gaaaggcatcttcctcgaggtaaatttctggatgcacttcatgaaactcaaagtctctgg
gcggacttggatgagttagagaattatcacaagcttcctggaacatctccgctagctaca
gggctgtgtttagcaatgtataaatgggccaaaggtgaccgccttgataatgtcctcttc
gatgctgatatgccggctggtgactttgttcgctgggctaaacaaaccatcgatctactt
gatcaacttgcacaggttactgacggagaactccagaaaactgcacgcgattcactcgac
caggttcgtcgaggcatcgttgcctattctgcggtggtgtaa
DBGET
integrated database retrieval system
