Aurantimicrobium sp. MWH-Uga1: AURUGA1_00900
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Entry
AURUGA1_00900 CDS
T05539
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
auw
Aurantimicrobium sp. MWH-Uga1
Brite
KEGG Orthology (KO) [BR:
auw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
auw03016
]
AURUGA1_00900 (rnd)
Enzymes [BR:
auw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AURUGA1_00900 (rnd)
Transfer RNA biogenesis [BR:
auw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AURUGA1_00900 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
TBP-binding
Motif
Other DBs
NCBI-ProteinID:
AXE54586
UniProt:
A0A344W2Z9
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All DBs
Position
884630..885826
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AA seq
398 aa
AA seq
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MVRVHVIASPEDFLAACEVISQGTGPIAIDAERASGFTYSQRAYLIQVHRREAGTFLFDP
PAIGDMSELFRRNDTEEWVLHAASQDLACLREVGIAPQRIFDTELSARLLGLDRVGLGSV
IEELLGVHLAKEHSAADWSTRPLPEPWLTYAAQDVELLVDLRDEIEKLLIESNKLSWAHE
EFQATLDKPEKVISTEPWRKISGLHTLRSPRQLAVARALWNARDYVAQTKDISPGRLIPD
SSIVAASKRTFSNKGELAACKEFNGRASRSLLEVWWEAVLRGNADENLPAMRIPSDTIPP
PRAWADKRPDALERLNTAKEKLSARAEELSMPTENLLTPSILRELAWAPPSTITVVSISA
GLKKLGARAWQIAETCALISNAFVEADQKFNLEPQESS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
gtggttagggttcacgtcatcgcttcacctgaagattttctcgccgcgtgcgaagtgatt
tctcaaggaactggcccaatcgccatcgatgcggaacgggcatctggatttacctactcg
caacgtgcatatctcatccaagttcatcgtcgcgaagcaggaacgtttttatttgaccct
ccagcaattggggacatgtcagagttatttcgacgaaatgacacagaagaatgggttctc
catgcagccagtcaggatctggcgtgtttgcgagaagtaggaattgctccgcaacgtatt
tttgatacggaactctctgcgcgcttgttgggtcttgatcgggtaggactgggttctgtt
attgaagaattattgggcgtccatttggctaaggaacatagcgctgctgattggtcgacc
agaccgctaccagagccttggttgacctatgcggcacaagatgttgaattactcgtcgac
ctgagagacgaaatcgaaaaactgctcatcgagtccaacaaactcagttgggctcacgaa
gagtttcaagcaacgctcgataaacctgagaaagtaatcagcacagagccctggagaaaa
atttcaggtcttcatacccttcgctcccccaggcaacttgctgttgcacgggcgctctgg
aatgcaagggattatgttgcacagacgaaagacatttcaccgggtcggctcattccagat
agctcgattgtggccgcaagcaaacgaactttttccaataagggtgaacttgcagcgtgt
aaagaattcaatggtcgggcaagccgcagcttgctcgaggtgtggtgggaagctgtgctt
agagggaatgctgacgaaaaccttcctgcaatgcgcattccctctgacaccattcccccc
ccacgtgcatgggctgataaacgtcccgatgctttagaacgcctgaatacggcaaaggaa
aaactgagcgcccgggctgaggaactgagtatgcctactgaaaacctcctcactccaagt
attttgcgtgaacttgcttgggcaccaccttccacaattactgtcgtcagcattagtgct
ggactgaaaaaattgggcgccagggcatggcagattgctgaaacctgcgctctgatctct
aatgcttttgtggaagccgaccaaaaatttaacctcgaaccccaagaatcttcgtag
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