Aurantimicrobium sp. MWH-Uga1: AURUGA1_01107
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Entry
AURUGA1_01107 CDS
T05539
Symbol
uvrD2
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
auw
Aurantimicrobium sp. MWH-Uga1
Pathway
auw03420
Nucleotide excision repair
auw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
auw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AURUGA1_01107 (uvrD2)
03430 Mismatch repair
AURUGA1_01107 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
auw03400
]
AURUGA1_01107 (uvrD2)
Enzymes [BR:
auw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AURUGA1_01107 (uvrD2)
DNA repair and recombination proteins [BR:
auw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AURUGA1_01107 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
AURUGA1_01107 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AXE54788
UniProt:
A0A344W3K1
LinkDB
All DBs
Position
complement(1096948..1098666)
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AA seq
572 aa
AA seq
DB search
MRENSVSSAEELLAGLDNDQRVVAEELRGPVCVLAGAGTGKTRAITHRIAYAIATGTYSP
DRVLALTFTNRAAGEMRTRLRQLGAGPVQAQTFHAAALRQLGHFWPKFVGGDAPQVFESK
SRPLAEVATKLGLKLDTATLRDLASEVEWRKTSNLNLSSYEKKAYSRAMPGNLAIADVLA
VMSGYEDLKDSRGQIDMEDVLLLTAGLLETEAAAAMEVRERYRFFVVDEYQDVSPLQHHL
LDLWLGEHRDVCVVGDASQTIYSFTGATSDYLLGFGARFPDAQVVKLETNYRSTAPIVSI
ANALMRDRPGALTLTAAQQGGSTPTLSAYPNDAAEARAVANKIATEIAAGTKPEDIAVLY
RINVQAVALEQALSDLGISTTVHGAQRFYDLPEVKQAILALRGASVSVVGEPLFKSVSDV
LRSVGWSQEAPQTTGAARSKWEALNALMVMADEAPAGTTFRAFTDELLARQAAKHEPTLH
AVTLASVHSAKGLEWDSVHVIGLSEGLFPISYAHNLEAIAEERRLLYVAITRARRQLSLS
WAQQGTGRATNRERSRFVAELGMHNLGAVNTP
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaaactctgtctcaagcgctgaagaacttctggcaggcctcgataatgatcag
cgtgtcgtcgccgaggagctacggggtcctgtctgtgttcttgccggggctggtacagga
aaaacccgcgccattacgcaccgtattgcctatgcaatcgcaaccggaacctattcacct
gaccgggttttagctctgaccttcaccaatcgcgctgccggtgaaatgagaacacggttg
cgccaattaggggcaggcccagttcaggcacaaacttttcacgccgcagcgctgcgtcaa
ctgggtcacttttggcccaagtttgttgggggagatgcgcctcaagtttttgaatcaaaa
tcgaggccgcttgcagaggtggccaccaaacttgggttgaaacttgatacagcaaccctt
cgagatttggcctccgaagttgaatggcgaaaaaccagcaatctcaacctctctagctat
gaaaagaaggcctattctcgagcgatgccaggcaacctcgccatcgccgacgttctcgcg
gtgatgagtggctatgaggatcttaaggattctcgtggacagattgatatggaagatgtg
ctgcttctgacagcaggcttgcttgaaacagaagcggcggctgcgatggaggtgcgcgag
cgataccgcttttttgtcgtagatgaatatcaggacgtctcacctttgcagcaccactta
ctcgatctgtggttaggagaacatcgtgatgtctgcgtagtcggggatgcaagccagacc
atttattccttcaccggtgccaccagcgattacctgttgggctttggcgcgagattcccc
gatgctcaggtggtgaagttggaaaccaactatcgatccactgctcccatagtttcaata
gcgaacgcgctgatgcgcgatcgcccaggcgctcttactcttacggcagcacaacaaggc
ggaagcacgcccactctgtcggcctaccccaacgatgcggcagaggctcgggctgtggca
aacaagattgccactgagattgcggcaggaaccaaacctgaagacatagcggtgttgtac
cgcatcaacgttcaggctgttgctctcgaacaggccctgtctgatttgggaatcagcaca
actgttcatggtgctcaacgcttttatgacctgcctgaagttaagcaagccattcttgcc
ttacgtggtgcatcagtttctgttgtgggtgagccgctgttcaagtcagtaagcgatgtg
ctgcgttcggtggggtggagccaagaggctccccaaaccaccggtgcagcacggtcgaag
tgggaggctctcaatgccctcatggtgatggcagatgaagcgcccgcgggaacaaccttc
cgcgcattcaccgatgaacttcttgcccgtcaagctgccaagcatgaacccaccctgcac
gctgttaccttggcgtcagtgcactccgcgaagggcttggagtgggacagtgttcacgtt
attgggctttctgaaggcctctttccaattagctatgctcacaaccttgaggctattgcc
gaggagcgcagacttctttacgtagcaattactcgagctaggaggcagctttcgctgtcg
tgggcacagcagggtactggtcgtgcaacgaatcgagaacgatcacgtttcgtggcagag
cttggcatgcacaatctgggtgcagtaaatactccctag
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