Aurantimicrobium sp. MWH-Uga1: AURUGA1_01172
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Entry
AURUGA1_01172 CDS
T05539
Symbol
fpg1
Name
(GenBank) Formamidopyrimidine-DNA glycosylase 1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
auw
Aurantimicrobium sp. MWH-Uga1
Pathway
auw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
auw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AURUGA1_01172 (fpg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
auw03400
]
AURUGA1_01172 (fpg1)
Enzymes [BR:
auw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AURUGA1_01172 (fpg1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AURUGA1_01172 (fpg1)
DNA repair and recombination proteins [BR:
auw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AURUGA1_01172 (fpg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
DUF3948
DZR
DUF7573
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
AXE54850
UniProt:
A0A344W3R3
LinkDB
All DBs
Position
complement(1173588..1174445)
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AA seq
285 aa
AA seq
DB search
MPELPEVEVVRAGLEPALVGARIDSVQVVDPRSLKRHDARRGDFVGMLQGATVLSAERRG
KFMWFPLDSGDALVTHLGMSGQVLLRDPAAEPDRHLRIQYGITHPEHGKLLVNFVDQRIF
GSMAVDELVEQPSGLVPAQAAHIALDPLDSFFDDELFISRLRKKSTGVKRALLDQTLISG
VGNIYADESLWAAKIHGERNADALSKAKAQELLLEVRKVLNKALAEGGTSFDAQYVNVNG
QSGYFAHSLNAYGQQGKPCPRCGTPIKKVSFMNRGSHFCPRCQKK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacttcccgaagttgaggttgtgcgcgctggtttagaaccagcacttgttggt
gctcgcattgattctgttcaggttgttgacccacgatctctgaaacgacacgatgcccgg
cgtggagatttcgtgggtatgttgcagggggcaactgttctttctgccgagcgtcgggga
aagttcatgtggtttcctctggattctggcgatgcgctcgttacgcacctcggaatgagc
ggacaagttttactccgggatccagctgcagaacctgatcgacatttgcgtattcaatat
ggaattacacatcctgagcacggaaagttgctagtcaactttgttgaccagcgcatcttt
gggtcgatggccgtagatgaactcgtggaacaaccttccggactagttccggctcaggcg
gcacacattgccttagacccacttgactctttctttgatgacgagttgttcatttctcgc
ctgaggaagaagagcacaggggttaagcgtgcattgctggatcagactctcatcagcggt
gtggggaacatctacgcagatgagtcgttgtgggcagcgaagattcacggcgaacgaaat
gccgacgcgttgagtaaagctaaagcacaagaactgttgctcgaggtccgaaaggttcta
aataaagccttggcggagggaggaaccagttttgacgcccagtatgtcaacgtcaacggc
caatcgggttactttgcacacagtttgaatgcttacggacagcaggggaaaccctgccct
cgatgtggtactcccatcaagaaagtttccttcatgaatcggggttctcacttctgtcct
cgctgtcagaaaaagtag
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