Aurantimicrobium sp. MWH-Uga1: AURUGA1_01441
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Entry
AURUGA1_01441 CDS
T05539
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
auw
Aurantimicrobium sp. MWH-Uga1
Pathway
auw03420
Nucleotide excision repair
auw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
auw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AURUGA1_01441 (uvrD1)
03430 Mismatch repair
AURUGA1_01441 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
auw03400
]
AURUGA1_01441 (uvrD1)
Enzymes [BR:
auw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AURUGA1_01441 (uvrD1)
DNA repair and recombination proteins [BR:
auw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AURUGA1_01441 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
AURUGA1_01441 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_16
ResIII
Motif
Other DBs
NCBI-ProteinID:
AXE55114
LinkDB
All DBs
Position
complement(1442192..1444519)
Genome browser
AA seq
775 aa
AA seq
DB search
MSELSSPNPLLDGLNPQQREAVEYRGPALLIVAGAGSGKTSVLTRRIASLISNREAWPSN
ILAITFTNKAAAEMRERAENMLGAATEGMWISTFHSSCVRILRREAENFGFTKAFTIYDS
HDSRTLIKRLIKEYEADTYGLSVSGVAGKISRLKNELSDVDSYSRNANLNDPTEVKFLEI
FRGYTRALQAANAFDFDDLIAQTVFLFRAFPHVADHYRKQFRHILVDEYQDTNHAQYALI
HELTRETADGLPGASLTVVGDSDQSIYAFRGADMRNIAEFERDFPGAHVVMLEQNYRSTQ
TILSAANAVISNNFDRKDKKLWTDVGDGDLIVGFTGYSAHDEAQFVVDEISALHAQGMGY
NEIAVFYRTNSQTRALEEIFIRSALPYRILGGTKFYERAEIKDILAYLVAVANPADSLAV
RRILNVPKRGIGPATETGLQNYADTNNITLREALRSAESLGLGPKVSGAIAKLSGLIDEA
TSLAESSPVAEVLTRILEETGYVELLRATRDPQDEARAENVEELLAVTKEFDKNNPGGTL
VDFLTEVSLVAAADELDDDSGTVSLMTLHTAKGLEYNAVFITGVEEELLPHRMSAGEPGG
PAEERRLFYVGITRARKKLFLSLAMSRAQFGQTNVAMPSRYLQEIPSELIDWRQSPGTVN
GRDGYQSRALNARGSRYDGGFGSSELGGWGSTEGGWNSLEAAPQPKTEWANRVTNKIRDN
GDLVLVAGDRISHADFGEGTVNQVTGEGAKSVAHVKFDTAGAKKLLIKIAPIEKL
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagctttcatcgcccaaccctttactggatgggcttaatccccagcagcgtgaa
gcggtggaataccgcggtcccgcattacttattgttgccggagcaggatcgggaaaaacc
agcgttctcacaaggcgcatcgcttccctgattagtaatcgggaagcgtggcctagcaat
atcttggcgatcacgttcaccaacaaagctgccgcagaaatgcgcgagcgcgcagaaaac
atgctgggtgcggcaaccgaggggatgtggatttccaccttccactcgtcttgtgttcgg
atactgcgacgtgaggcagagaactttggcttcacaaaagcgttcaccatctacgattca
catgactcacgcaccctcatcaagcgcctgattaaagagtatgaagcagacacgtatggt
ctctctgtttcgggtgttgcaggaaagatttctcgactcaaaaatgagctctctgatgtt
gatagctattcgcgcaatgcaaatctcaatgatccaaccgaggtgaagttcctcgaaatt
ttccgcggatacactcgcgcgctccaagcagccaacgcctttgactttgatgaccttatt
gcccagacagtgtttttatttcgggcattcccacatgttgcagatcactatcgcaaacaa
tttaggcacattctggtggacgagtatcaggacaccaaccacgcacaatatgcccttatt
cacgagctcactcgggaaacagctgacggtcttccgggtgcttcactgacggtggtgggt
gattccgatcagtccatttacgctttccggggcgctgatatgcgcaacattgctgagttt
gagcgtgattttcccggcgcccacgtggtcatgctggagcaaaactaccgttcaacgcag
acaattctttcggcagctaatgcagtcatttccaacaactttgatcgcaaagataaaaag
ctgtggaccgatgtgggcgatggtgatctcattgttggattcaccggttactcagcacac
gatgaggcacagtttgttgtcgatgaaattagtgcactccacgcccaagggatgggctac
aacgagatagctgtgttctatcgaacgaactctcaaacacgtgcgctggaagaaatcttt
atccgttcggctcttccctaccgaatcttgggcggcactaagttctatgaacgtgcagag
atcaaagacatcctggcgtacttagttgctgtagcgaacccagctgattcgctcgctgtg
cgccgtattctcaatgttcccaaacgcggaattggtccagccactgaaacaggtttacag
aactacgctgataccaacaacatcactttgcgcgaagcattacgctctgcagagtcgctc
ggccttggccccaaggtctctggagcaattgccaaactttcgggcctcattgatgaagca
acatcgttggccgaatcttcacccgttgctgaagtcctcacacgcattctggaagaaacc
ggatacgtggagctgctcagagcaacccgggatcctcaagacgaagcacgcgctgaaaac
gtcgaagaactcttggcagtgaccaaagagtttgataagaacaacccaggcggcacgctt
gttgatttcttgaccgaagtttcactcgtggcagccgcagatgagcttgatgatgacagt
ggcaccgtctcgctcatgaccttgcacaccgcaaaaggcctggaatacaacgcagtgttc
atcacgggtgtcgaagaagaacttcttcctcaccggatgtccgcaggtgaaccgggagga
cctgccgaagagcgccgtttgttttatgtgggaattactcgcgcacgaaagaaacttttc
ctctctttggcgatgagtcgagcacagtttggtcagaccaatgtggcgatgccgtcgcgc
tatctgcaggagattccttcagagctcattgactggcgccagtcgcccggaacagtgaac
ggccgtgacggttatcaatcacgagcactcaatgctcgaggttcgcgctatgacggtgga
tttggttcgagtgagcttggtggttggggatccacggaaggtggctggaattctctcgag
gctgcccctcaaccaaagaccgaatgggctaatcgggtcaccaacaaaattcgtgataac
ggcgaccttgttctcgtggcaggcgaccgtatttctcacgctgactttggtgaaggaact
gtgaaccaagtcactggtgagggtgccaagagtgttgctcacgtgaagtttgatacagca
ggagccaagaagcttctgattaagatcgcgccaatcgagaagttatag
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