Aurantimicrobium sp. MWH-Uga1: AURUGA1_01488
Help
Entry
AURUGA1_01488 CDS
T05539
Symbol
lgrD
Name
(GenBank) Linear gramicidin synthase subunit D
Organism
auw
Aurantimicrobium sp. MWH-Uga1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Hexapep
PP-binding
Hexapep_2
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AXE55158
LinkDB
All DBs
Position
1487026..1491000
Genome browser
AA seq
1324 aa
AA seq
DB search
MPENLSQSREAQSVLSRLSSAPAPRTLIDIFREVTNSNADETALDDGTTRLSYRDLTEQA
LAVAHQLHSYGVQRGNRVGIRIESGSVDLYIAILGILHAGAAYVPVDADDPDERARVVFS
EAEVNGVIATGGKFLQSEIPGGELRQVGQIDFDYRETVFPEEFAPLETDDAWIIFTSGST
GKPKGVAVSHRSAAAFVDAESRMFLQAEPINAQDRVLAGLSVAFDASCEEMWLAWGHGGC
LVPAPRSLVRSGSDLGPWLMANGITIVSTVPTLAAMWPEDALENIRLLIFGGEAFPLELA
EKLASSGREVWNTYGPTEATVVACGAQTTGSGPMRIGLPLDGWDLAVVNSEGHRVAEGET
GELIIGGVGLARYLDTEKDSQVYAPFPTLGWDRAYRSGDMVRYEAEGLIFVGRVDDQVKV
GGRRIELGEIESALSALPDVTAGAVVVQTTQAGNKVLVGYISVTEVETFSVADALVTLRD
SLPAPLIPLLVPLAELPVRTSGKVDKAALPWPLANADLDELDFTEIERRVASEWAVVLGV
PVTDLNTHFFDTGGGSLAAAQLVGRLRALYPSMTVADIYAHPRLGSMSDFIDVSTAGELI
PSGSFHKSPKVPQSPQLIQAVLSIPLFALAGLRWLFYALAASTLLGLLGVVDFLPTAPLA
ILIPGILLFGSPWGRMLLSVAISRTVLAGLRPGNYLRGGSTHLRLWFAEQAASHIGAVTL
AGAPWVTAYARALGARIGQGVTMHTLPPITGMLWVGAGASIEPEVDLTGYWIDGDVVRVG
EIRIGAHATIGARSTLAPGTRIGKFAEIAPGSSVFGKVPAGQLWSGSPAKREGKVKAWWP
QEPATQSRAWGALFAFSSGVFALFPLVSLLCGAAVVLAALQQTQSVSDVLSIVAVGFIPA
TVLAGFIFTVLVLASVRILSLTMREGIFPVHSWAGWQAWSVERILDLARTFLFPLYSSLF
TPIWLRMLGAKVGHNVEASTVLMLPKMSTIGDDVFLADDTMIAPYALGNGWMFIGPVEIG
KRAFIGNSGLAPAGRKVPKDALVAVLSSAPRKAKEGSSWLGSPPMRLRRLIAEGDRERTY
KPSQWLRIARSLWELTRFVPVLVTALIGFAVVCGILLADSLWGMWAAVLLSGPLLWAAGI
IAAAVSTIAKWVLVGKIKPQEKPLWSSFIWRNEVADTFVEMVAAPWFANYMNGTLGLVWW
LRSLGAKIGGGVWCETYWLPEADLVTLGDGATVNRGTVLQTHLFHDRVMSMDTVTVEAGG
TLGPHSVILPAARIGAHSTVGPASLVMRGEAVPEGSRWSGNPIGPWREVTVRKYFSDTAS
VKTV
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaaacctttctcagagccgtgaagcacagtcggtgctctctcgtctgagtagt
gccccggccccacggacactcatcgacatcttccgcgaggtcaccaattccaacgctgac
gaaacagctttggacgacggtactactcgtctgagctatcgagacttaacagaacaggct
ctggccgtggcccaccaactccattcctatggggtgcagcggggcaatcgtgtgggcatt
cgaattgagtcgggcagtgttgatttatacatcgccatcttgggaattctgcatgcgggt
gctgcctacgttcctgtcgatgccgatgatcctgatgaacgcgcacgagttgtgttttca
gaagcagaagtcaacggagttatcgccaccggcggtaagttcctgcagtcagagataccc
ggcggggaactcagacaagtaggtcagattgattttgactaccgcgagaccgtctttcct
gaagagtttgctcccctcgagaccgacgacgcatggattatttttacctctggctcaacg
gggaagcccaagggcgtcgccgtctcccaccgctctgcagctgcctttgtcgatgcagag
tctcggatgtttttgcaagccgaaccaatcaatgcccaagaccgagtgcttgcaggcctc
tccgttgcgtttgatgcatcgtgtgaagagatgtggcttgcctggggccacggtggttgt
ctcgttcctgcccctcgttctttggtcagatcgggttcagacctaggaccatggctgatg
gccaatggcatcaccattgtctcgactgtgcccaccttggcagcgatgtggcccgaggat
gcccttgaaaacattcgtctgttgattttcggtggtgaagcattcccactcgagctggca
gaaaaactggcttcatccggccgtgaggtctggaacacctatggccccaccgaggcaacg
gtcgttgcctgtggagcgcaaaccaccggtagcggacccatgagaattgggctccccctg
gacgggtgggacctcgctgtggtcaactccgaagggcatcgtgttgcagaaggtgaaacc
ggcgagctgatcattggtggcgtgggacttgcgagatatctggatacggagaaagactcc
caggtttatgcccccttccccacattgggctgggatcgtgcttaccgcagcggcgacatg
gttcgctatgaagcagaaggcctgatttttgtcggtcgtgttgatgaccaagtcaaggtc
ggtggccgccgaattgaactgggtgaaattgaaagtgctctgagtgctctccccgatgtc
accgcaggggctgtggttgtgcaaacaacacaggcaggcaacaaggttcttgtcggctac
atcagtgtcactgaggttgagactttctctgtcgctgatgcactggtgaccttgcgtgat
tccctccccgcgcctctcattccattactggttcctcttgctgagcttccggttagaacc
tccggcaaagtcgataaagctgctctgccctggccgctagctaacgctgacctagatgaa
ctcgatttcacagagatcgaacgacgcgtcgccagcgaatgggctgtagttctcggtgtt
cccgtgacggacctcaacacacacttctttgacaccggtgggggttctctggcagctgcc
caactagttggaaggctccgtgccctgtaccccagcatgacggtggcagatatctatgcc
caccctcggttgggatccatgtctgacttcatcgatgtcagcacagcaggagaacttatt
ccctccgggtccttccacaaatcaccaaaagttccccaatccccgcagctcatccaggca
gtgctctccattcccttgtttgcgttggcgggactgagatggttgttttatgccctggcc
gcatccacgttgctgggcttgctgggcgttgttgacttcctgccgactgctccgcttgcc
attttgattccgggcatcttgttatttggttccccgtggggccgaatgttgctcagcgtt
gcgatttccagaactgtgctcgcagggttgcgacccggaaactatctccgaggtggctcc
acccatttgcgtttgtggtttgcagaacaggcagcctcacatatcggagcggtgacgttg
gctggagcaccctgggtcaccgcctatgcacgggcactgggtgcacgaattggtcagggt
gtcaccatgcacaccctccctcccatcaccgggatgttgtgggttggtgcaggtgcatcg
attgaacctgaggttgatctcaccggttattggatcgacggcgatgtagttcgtgtgggt
gaaatccgcattggtgctcacgcaaccatcggtgcacgcagcactctcgccccgggaact
cgtattggcaagtttgctgagattgctcccggctcgagcgtgtttggaaaagttcctgca
ggacagctgtggagtggttccccagccaaacgtgaaggcaaggtcaaagcgtggtggcca
caggaacccgccacacaatctcgcgcgtggggggcgctcttcgctttctcttcgggagtc
tttgcactattccctctggtgtctttattgtgtggtgctgcagttgtgttagccgcattg
cagcagacgcagtcggtctctgacgtgctgagcatcgtcgcggtgggatttatccctgcg
acagtgctcgccggatttatctttactgttctcgttcttgcctctgttcgcatcctcagc
ctcactatgcgagaaggcatcttcccggttcacagctgggctgggtggcaagcatggagt
gtggagcgaatcctcgatttggctcgcacattcctctttcctctctactcaagcctgttc
accccgatctggctgcgcatgctgggagccaaggtcggacacaacgtggaagcgtcaacc
gtgttgatgcttcccaagatgtccaccattggtgacgatgtcttcttggctgatgacacc
atgattgctccctatgcactcggtaacgggtggatgtttattgggccggtagagattggt
aagcgtgccttcatcggcaactctggcttggcacctgccggacgtaaggttcctaaagat
gccttggtggccgtcctatcgagtgctcctcgcaaggccaaagaaggatcgtcctggttg
ggttctccgcccatgcgcttgcgcagactcatcgctgaaggagaccgtgagcgcacctac
aaaccatctcaatggctccggattgcccgtagtttgtgggagctgaccaggtttgttccc
gtgctggttaccgccctcattggctttgccgtggtgtgtggcattttgcttgcggattcg
ttgtggggaatgtgggctgcagtgctgctcagtggccccttgttgtgggcggcaggaatc
atcgcagcagccgtcagcaccattgcgaagtgggttcttgtgggcaaaattaagccccaa
gaaaagccactgtggtcttcctttatttggcgcaacgaagtggccgacacctttgtcgag
atggtggctgcgccttggtttgccaactacatgaatggcaccctcggtcttgtctggtgg
ctgcgcagcctgggcgccaagattggcggcggagtttggtgtgaaacgtattggcttcct
gaagcggatctggtcaccctcggtgacggcgccaccgtcaacagaggcactgttctgcaa
acacatctgttccatgacagagtgatgagtatggacacggtaacggtggaagcgggcgga
actctcggcccccacagtgtgattcttcctgccgcacgcatcggtgcccacagcaccgtc
ggtccggcatctctagtcatgcgtggtgaagccgttccagagggaagccgctggagcggt
aaccctattggcccatggcgtgaagtgactgtgcggaaatacttttcagacacagcgtca
gtgaagacggtgtga
DBGET
integrated database retrieval system
