Aureimonas sp. SA4125: Sa4125_09740
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Entry
Sa4125_09740 CDS
T08429
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
auz
Aureimonas sp. SA4125
Pathway
auz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
auz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sa4125_09740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
auz03019
]
Sa4125_09740
03009 Ribosome biogenesis [BR:
auz03009
]
Sa4125_09740
Enzymes [BR:
auz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Sa4125_09740
Messenger RNA biogenesis [BR:
auz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Sa4125_09740
Ribosome biogenesis [BR:
auz03009
]
Prokaryotic type
rRNA helicases
Sa4125_09740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BDA83432
LinkDB
All DBs
Position
1068036..1069814
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AA seq
592 aa
AA seq
DB search
MPFRPTSLPLERALAEHDYTEPTPVQDAVLEPETAGRDLLVSAQTGSGKTVAYGLAIAST
LLGDAERLGPADQPLALVVAPTRELALQVHRELEWLYAHAGATIVTCVGGMDPRAEQKKL
NAGAHIVVGTPGRLRDHLERGRLRIGNLKAVILDEADEMLDLGFREDLEFILEATPKERR
TLLFSATLPKAITALAKRYQRDAMRIEASRGVTGHVDIEYRAVRIAPNEVEHAVVNLLRS
AESPSAIVFCNTREAVRHLHSGLLERGFSAVALSGELGQNERNAAMQALRDGRARVCIAT
DVASRGIDLPNLGLVIHAELPNDAESLQHRSGRTGRAGRKGVSVLLVPISRRRKAERLLA
EANIHPTWGGAPTADEIRKLDEERLLSDPILTQESTEEDQAVAAALLARHSAEDLAAALA
RIYRSRLPAPEDVYDPGFARDTKPAKNYAETGERGTRRERDAVVRGAGGATVWFHMDIGR
RNNADPKWLLPLICRRGSVTRDDIGAIRIFDRETKFEIAEAMAAKFSASAQGIDADDITI
SRMAEGADTRPAPRTDSPRPRKPYAGKSGSTESAARPGGDKAYAKPRRPKKP
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
gtgccgttccgcccgaccagcctgcccctcgaacgcgctctcgccgagcacgactacacc
gaaccgacaccggtccaggacgccgtcctcgagccggaaaccgcaggccgcgacctgctc
gtctcggctcagaccggatccggcaagacggtcgcctacggtctcgccatcgcctcgacg
ctgctcggcgatgccgagcgcctcggccccgccgaccagccgctcgccctcgtcgtcgcc
ccgacgcgcgaactggcgctgcaggtgcaccgcgaactcgaatggctctacgcccatgcc
ggtgcgacgatcgtcacctgcgtcggcggcatggacccgcgcgccgagcagaagaagctg
aacgccggtgcccatatcgtcgtcggcacccccggccgcctgcgtgaccatctggagcgc
ggccgcctgcgcatcggcaacctcaaggccgtcatcctcgacgaggccgacgagatgctc
gacctcggcttccgcgaggacctcgaattcatcctcgaggcgaccccgaaggagcgccgc
acgctcctcttctcggcgacgctgccgaaggcgatcaccgcgctcgccaagcgctaccag
cgcgacgccatgcgcatcgaggcctcgcgcggcgtcaccggtcacgtcgatatcgaatac
cgggccgtgcgcatagccccgaacgaggtcgagcacgccgtcgtcaaccttctgcgctcg
gccgaatcgcccagcgccatcgtcttctgcaacacccgcgaagccgtccggcaccttcat
tcgggcctgctcgagcgcggattttcggccgtcgctctgtcgggcgagctcggccagaac
gagcgtaacgccgccatgcaggcgctgcgcgacggccgcgcccgcgtctgcatcgccacc
gatgtcgcctcgcgcggcatcgacctgcccaatctcggcctcgtcatccatgccgaattg
ccgaacgacgcggaatcgctgcagcaccggagcgggcgcaccggccgcgccggccgcaag
ggcgtgtccgtcctgctggttccgatctcgcgccgccgcaaggccgagcgcctgctcgcc
gaggccaacatccatccgacctggggcggcgcgccgaccgccgacgagatccgcaagctc
gacgaggagcgactgctctccgacccgatcctgacgcaggaatcgaccgaggaggaccag
gctgtcgccgccgcgcttctcgccaggcacagcgccgaggaccttgccgccgcgctcgcg
cgcatctaccgctcgcgcctgccggcgcccgaggatgtctacgaccccggctttgcccgc
gacaccaagccggcgaagaactatgccgagaccggcgaacgcggcacgcggcgcgagcgc
gatgcggtcgtgcgcggcgccggcggcgccaccgtctggttccacatggacatcggccgg
cgcaacaatgccgatccgaaatggctgctgccgctgatctgccgccgcggttcggtgacg
cgcgacgacatcggtgccatccgcatcttcgaccgcgagaccaagttcgagatcgccgag
gcgatggcggcgaaattctcggcgagcgcgcaggggatcgatgccgacgacatcaccatc
tcgcgcatggccgaaggcgccgacacgaggcccgcgccccgcaccgactccccgcgcccc
cgcaagccctacgccggcaagtccggctcgaccgagagcgccgcgcgccccggcggcgac
aaggcctatgccaagccgcgccggccgaagaagccgtaa
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