Aureimonas sp. SA4125: Sa4125_23200
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Entry
Sa4125_23200 CDS
T08429
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
auz
Aureimonas sp. SA4125
Pathway
auz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
auz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Sa4125_23200 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
auz03021
]
Sa4125_23200 (rpoA)
03400 DNA repair and recombination proteins [BR:
auz03400
]
Sa4125_23200 (rpoA)
Enzymes [BR:
auz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Sa4125_23200 (rpoA)
Transcription machinery [BR:
auz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Sa4125_23200 (rpoA)
DNA repair and recombination proteins [BR:
auz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Sa4125_23200 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
BDA84778
LinkDB
All DBs
Position
complement(2502146..2503165)
Genome browser
AA seq
339 aa
AA seq
DB search
MISSNWQNLTKPNSVVFKSGGSRTKASLTAEPLERGFGLTLGNALRRVLLSSLQGAAVTA
IQIDGVLHEFSSIPGVREDVTDIVLNVKEIAIGMQGEGPKRMVLRKSGPGIVRAGDIQTV
GDIEILNPEHELCTLDEGAEIRIEFTVDTGKGYVPADQNRAEDAPIGLIPVDSLFSPVKK
VSYKVENTREGQDLNKDKLTMQIETDGSISGEDSVAYAARILQDQLSIFVNFEEPQRETR
SAEEHIAELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRK
SLNEIKEVLAAMGLHLGMEVSAWPPENIDDLAKRYEDQY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgatttccagcaattggcaaaatctcaccaagcccaacagcgtggtcttcaagagcggc
ggaagccgcacgaaggcctccctgacggccgagccgctggagcgcggcttcggcctgacg
ctcggcaacgcgctgcggcgcgtgctcctgtcgtcgctccagggtgcggccgtcaccgcg
atccagatcgacggcgtgctgcacgagttctcctcgatcccgggcgtccgcgaggacgtc
accgacatcgtcctgaacgtcaaggaaatcgccatcggcatgcagggcgaaggcccgaag
cggatggtgctgcgcaagtctggtccgggcatcgtgcgcgccggcgacatccagaccgtg
ggcgacatcgagatcctgaaccccgagcacgagctctgcaccctcgacgagggcgccgag
atccgtatcgagttcaccgtcgacacgggcaagggctacgttccggctgaccagaaccgg
gcggaagacgcgccgatcgggctgatcccggtcgacagcctgttctcgcccgtgaagaag
gtgtcctacaaggtcgagaacacccgcgaggggcaggacctgaacaaggacaagctcacc
atgcagatcgagaccgatggctcgatctctggcgaggattcggtcgcctatgccgcgcgc
atcctgcaggaccagctctctatcttcgtgaacttcgaggagccgcagcgcgagacccgc
agtgcggaggagcatatcgcggagctggcgttcaacccggctctcctcaagaaggtcgac
gaactcgaactgtccgtccgttcggcgaactgcctgaagaacgacaacatcgtctacatc
ggcgacctcatccagaagaccgaggcggaaatgctccggacgccgaacttcggtcgcaag
tcgctgaacgagatcaaggaggtcctcgctgccatgggccttcatctcggcatggaagtc
agcgcctggccgccggagaatatcgacgatctggccaagcgctacgaagaccagtactaa
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