Aureimonas sp. SA4125: Sa4125_33330
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Entry
Sa4125_33330 CDS
T08429
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
auz
Aureimonas sp. SA4125
Pathway
auz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
auz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sa4125_33330 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
auz03400
]
Sa4125_33330 (uvrB)
DNA repair and recombination proteins [BR:
auz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sa4125_33330 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sa4125_33330 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
FlgI
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BDA85791
LinkDB
All DBs
Position
3518312..3521326
Genome browser
AA seq
1004 aa
AA seq
DB search
MADPKQKSPRRSPILDFSDASERLAPGFGEAPQAEFDGAPLGGPISGWADEIARQAEVES
ERAADSGTVSAEIRPQEDRPARKPRAAKTEKPGKADGAAKPGRSSRGTSMGGTTDPKRRA
AAGLNPVAGMDISLEDAAALPEGGVTATVEALSRLISEGNPLIKNGEVWLPHRPARPEKS
EGGVPFRIKSDFEPAGDQPTAIADLVSGIREHDQTQVLLGVTGSGKTFTVAKVIEATQRP
ALILAPNKTLAAQLYGEFKNFFPDNAVEYFVSYYDYYQPEAYVPRSDTFIEKESSINEQI
DRMRHAATRSLLERDDVIIVASVSCIYGIGSVETYTAMTFQMAVGDRLDQRQLLADLVAQ
QYKRRDMDFVRGSFRVRGDTIEIFPAHLEDRAWRISMFGDEIETIQEFDPLTGAKTDDLK
SVKIYASSHYVTPRPTLQQAVKLIKIELKQRLEELQRAGRLLEAQRLEQRVTFDVEMIEA
TGSCAGIENYSRYLTGRQPGHPPPTLFEYLPDNALVFIDESHVTIPQIGAMYRGDFRRKA
TLAEYGFRLPSCMDNRPLRFEEWNAMRPQTVAVSATPGAWEMEDAGGVFAEQVIRPTGLT
DPPIEIRPARSQVDDLLGEIRETVAKGYRVLVTVLTKRMAEDLTEYLHEHGVRVRYMHSD
IETLERIEIIRDLRLGAFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQTI
GRAARNVDGKVILYADRTTGSMERAIAETNRRRDKQEAYNTEHGITPASVKAHIADILDS
YYEKDHVRVPTGGLVAEGAMVGNNLKSHLEYLQKEMRDAAANLDFETAARLRDEVKRLQA
TELAIGNDPLARDLELEGPSSGRTKHGGKLKGPQGPALAPGSVGTFERTGPSLIKAAKAK
EAEVKPSYFQKPGIDDMGPGTDTAIPLRDPLFRKNSLDEMTVGRTEKPLPKGPLPKKPVH
ASQTAPDSPAPIRREKIGIGSYEDPGDAKRKGGRRTGKTGRPGR
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcccaagcagaaatccccgcggcgctcgccgatcctcgacttctccgacgcc
tccgagcgtctcgcccccggcttcggcgaggcgccgcaggcggaattcgacggggcgccg
ctcggcgggcccatctccggctgggccgacgagatcgcccgccaggcggaggtcgaatcc
gagcgcgccgccgacagcggcaccgtctctgccgagatccgtccgcaggaggacagaccg
gccaggaaaccccgtgccgcgaagacggaaaagcccggcaaggcggacggcgcggccaaa
cccggccgctcgtcccgcggcacctcgatgggcggcaccaccgaccccaagcgccgcgcc
gccgcgggcctcaatcccgtcgccggcatggatatcagcctggaggatgccgccgcgctg
ccggagggcggcgttaccgccaccgtcgaggcgctgtcgcggctgatctccgagggcaac
ccgctgatcaagaacggcgaggtctggctgccgcaccggccggcccggcccgagaagtcg
gaaggcggcgtgccgttccggatcaagtccgacttcgagcccgccggcgaccagccgacg
gcgatcgccgacctcgtctccggcatcagggagcacgaccagacgcaggtcctcctcggc
gtcaccggttccggcaagaccttcaccgtcgccaaggtgatcgaggcgacgcagcgcccg
gcgctgatcctcgcgccgaacaagacgctcgccgcccagctctacggcgagttcaagaac
ttcttccccgacaacgcggtggagtatttcgtctcctattacgactactaccagcccgag
gcctatgtgccgcgttcggacaccttcatcgagaaggaatcctcgatcaacgagcagatc
gaccggatgcgccacgccgccacccgctcgctgctcgagcgcgacgacgtcatcatcgtc
gcctcggtgtcctgcatctacggtatcggctcggtcgagacctatacggcgatgaccttc
cagatggcggtgggcgaccggctcgaccagcgccagctgctcgccgacctcgtcgcccag
cagtacaagcgacgcgacatggatttcgtccgcggctcgttccgggtgcgcggcgacacg
atcgagatctttccggcgcatctggaggaccgggcctggcgcatctcgatgttcggcgac
gaaatcgagaccatccaggaattcgacccgctcacaggcgccaagaccgacgacctgaag
agcgtcaagatctacgcctcctcgcactacgtcacccccaggccgacgctgcagcaggca
gtgaagctgatcaagatcgagctgaagcagcggctggaggagctgcagcgcgccggccgt
ctgctcgaggcgcagcggctggagcagcgcgtcaccttcgacgtcgagatgatcgaggcg
acaggctcctgcgccggcatcgagaactattcgcgctaccttaccggccgccagcccggc
cacccgccgccgacgctgttcgaatacctgcccgacaacgccctcgtcttcatcgacgag
agccatgtcaccatcccccagatcggggccatgtaccgcggcgacttcaggcgcaaggcg
acgctggcggaatacgggttccgcctgccctcctgcatggacaaccggccgctgcgcttc
gaggagtggaacgccatgcggccgcagaccgtcgccgtctcggcgacgccgggcgcctgg
gagatggaggatgccggcggcgtcttcgccgagcaggtgatccgcccgaccggcctcacc
gatccgccgatcgagatccgcccggcgcgcagccaggtcgacgacctcctcggcgagatc
cgcgagaccgtcgccaagggctatcgcgtcctcgtcacggtgctgaccaagcgcatggcc
gaggatctgaccgaatacctgcatgagcacggcgtgcgcgtgcgctacatgcattccgac
atcgagacgctggagcggatcgagatcatccgcgacctccgccttggcgccttcgacgtg
ctcgtcggcatcaacctcctgcgcgagggcctcgacatcccggaatgcggcctcgtcgcc
attctcgacgccgacaaggaaggcttcctgcgttcggagacctcgctgatccagaccatc
ggccgcgccgcgcgcaatgtcgacggcaaggtgatcctctatgccgaccgcaccaccggc
tcgatggagcgggcgatcgccgagaccaaccggcgccgcgacaagcaggaggcctacaac
accgagcacggcatcacgccggcgagcgtcaaggcgcacatcgccgacattctcgacagc
tattacgagaaggaccatgtccgcgtgcccaccggcggccttgtcgccgaaggcgccatg
gtcggcaacaatctcaagagccacctcgaatacctgcagaaggaaatgcgcgacgccgcc
gccaatctcgacttcgagaccgccgcgcgcctgcgcgacgaggtcaagcggctgcaggcg
acggagctcgccatcggcaacgacccacttgcccgcgatctcgaactcgaaggcccgtcc
tcggggcgcaccaagcatggcggcaagctgaagggcccgcagggcccggcgctcgcgccc
ggctccgtcggcacattcgagcgcaccggcccgtcgctgatcaaggccgccaaggcgaag
gaggccgaggtaaagccctcctacttccagaagccggggatcgacgacatgggaccgggc
accgacacggccatccccttgcgcgatcccctgttccgcaagaacagcctcgacgagatg
accgtcggccgcaccgagaagccgctgccaaaaggccccttgccgaagaagccggtgcac
gcctcgcagacagcgcccgactcccccgccccgatccggcgggagaagatcggcatcggc
tcgtatgaggatccgggcgatgccaagcgcaagggcggacggagaacggggaagacggga
cggccggggcggtga
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