Aureimonas sp. SA4125: Sa4125_43840
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Entry
Sa4125_43840 CDS
T08429
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
auz
Aureimonas sp. SA4125
Pathway
auz03030
DNA replication
auz03430
Mismatch repair
auz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
auz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sa4125_43840 (holA)
03430 Mismatch repair
Sa4125_43840 (holA)
03440 Homologous recombination
Sa4125_43840 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
auz03032
]
Sa4125_43840 (holA)
03400 DNA repair and recombination proteins [BR:
auz03400
]
Sa4125_43840 (holA)
Enzymes [BR:
auz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sa4125_43840 (holA)
DNA replication proteins [BR:
auz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sa4125_43840 (holA)
DNA repair and recombination proteins [BR:
auz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sa4125_43840 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF2620
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
BDA86842
LinkDB
All DBs
Position
4634792..4635844
Genome browser
AA seq
350 aa
AA seq
DB search
MAEKKAGEVEAFLSRPDTSFPTVLLYGPDSGLVSERAAKIASLSGVNLKDPFAAIALSAD
ELEKDIGRLYDEARTISMFGGRRLIRVRGAGTGSGKALAEAVAVFGKEPPVDVTIIIEAG
DLKKSAPLRAAAEKGRAAMALPCYQDEGRALDMMIDEEMKLSGLTIARDAREALRARLGA
NRLASRGEVQKLCLYCLGKTAVEEADIEAIVGDVSVDTVEETIDAAASGEVRKLPELIAR
LTSAGTAPFLLHQGLLRYFQALQLMRQSVERGGQTVSRVVESRHPHFRRKAAMEAAVGLW
SLDAVGPVLAGIEADILASRKESALAQTIVRQTLLTVAVEAARLRSRGRR
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaagaaggccggggaggtcgaggcctttctctcccgccccgacaccagcttt
ccgaccgtccttctctacggccccgattcggggctcgtttccgagcgcgccgcaaagatc
gcgagcctctccggcgtcaacctgaaggacccgttcgcggcgatcgccctttccgccgac
gagctcgaaaaggacatcggtcgcctctacgacgaggcccggaccatttcgatgttcggc
ggccgccgcctgatccgggtgcgcggcgccggcacgggcagcggcaaggcgctggccgag
gctgtggcggtcttcggcaaggaaccgcccgtcgacgttaccatcatcatcgaggccggc
gacctgaagaagagcgcgccgctgcgcgccgccgccgagaagggcagggcggcgatggcg
ctgccctgctaccaggatgaggggcgggccctcgacatgatgatcgacgaggagatgaaa
ctctccggcctcaccattgcccgcgacgccagggaggccctgcgcgcgcgcctcggtgcc
aaccgcctggcgtcgcgcggagaagtgcagaagctctgtctctactgcctggggaagacg
gcggtggaagaggccgacatcgaggcgatcgtcggcgacgtctcggtcgacacggtcgag
gagacgatcgatgcggcagcgtcgggcgaggtgcgcaagctgcccgagctgatcgcccgg
ctgacctccgccgggaccgcgccctttctcctgcaccagggtctcctgcgctatttccag
gcactgcagctgatgcgccagtcggtcgagcggggcggccagacggtgtcgcgcgtcgtc
gagagccgccacccgcatttccgccgcaaggcggcgatggaggcggccgtcggcctgtgg
agtctcgacgccgtcggcccggttctggccgggatcgaggccgacatccttgccagccgc
aaggaatcggctctcgcgcagaccatcgtccgccagacgctcctcaccgtcgccgtcgag
gccgcacgcctgcgctcgcgcggccggcgatag
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