Trichormus variabilis: Ava_0146
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Entry
Ava_0146 CDS
T00277
Name
(GenBank) Allophycocyanin, beta subunit
KO
K02097
phycobilisome core component
Organism
ava
Trichormus variabilis
Pathway
ava00196
Photosynthesis - antenna proteins
ava01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
Ava_0146
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
ava00194
]
Ava_0146
Photosynthesis proteins [BR:
ava00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Allophycocyanin (AP)
Ava_0146
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Gene cluster
GFIT
Motif
Pfam:
Phycobilisome
RE_Eco47II
Motif
Other DBs
NCBI-ProteinID:
ABA19772
UniProt:
Q3MGW4
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All DBs
Position
complement(195645..196154)
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AA seq
169 aa
AA seq
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MRDAVTSLIKNYDVAGRYFDRNAIDTLKDYFDSGTARVQAAAAINSNAAALVKQAGSKLF
EELPELIRPGGNAYTTRRLAACLRDMDYYLRYATYALVAGNTNVLDERVLQGLRETYNSL
GVPIGPTVRGVQILKDLVKEQVASTGIANAAFVEEPFDHITRELSERDV
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgcagtaacaagcttaattaagaattatgacgtagctggtcggtattttgac
cgaaatgcgatcgataccctcaaagattattttgacagtggtacggctcgtgtccaagca
gccgccgcaattaactccaatgcagctgcactggtcaagcaagcaggttctaagttgttt
gaagagctgccagagttaattcgtcctggtggtaatgcctacacaactcgtcgtctagcg
gcttgtttacgggatatggattactacttgcgctacgctacttatgcgctggttgctggt
aataccaatgttttagatgagcgggtgctgcaaggcttgcgggaaacgtacaattctttg
ggtgtacccattggccctacagttcgcggtgtacaaattctcaaggatttggtcaaggaa
caagttgcaagtacaggtattgccaacgctgcttttgttgaggagccatttgaccacatt
actcgtgaattaagcgagcgagatgtttaa
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