Trichormus variabilis: Ava_0301
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Entry
Ava_0301 CDS
T00277
Name
(GenBank) two component transcriptional regulator, LuxR family
Organism
ava
Trichormus variabilis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
DUF6115
DUF7646
Sigma70_ECF
HTH_29
Vps5
RPA_C
LytR_C
Motif
Other DBs
NCBI-ProteinID:
ABA19927
UniProt:
Q3MGF9
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Position
385286..385981
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AA seq
231 aa
AA seq
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MSAQLLLVDDEPGLREAVKDYLQESGFSVQVASNAREGWDLMQQSTPDLVISDVMMPQVD
GYQFLKQLREDPRFQSLPVVFLTAKGMTSDRIQGYQAGVDAYLPKPFDPDELVAIIENLL
TRRNSKPPKTTEEGETPDIAELANQIAQIKALLTQRNAISQSPAPFKIDLTPREQSVLNL
VAEGLMNKEIARRLETSVRNVEKYVSRLFSKTGTNSRTELVRFALEHGLAK
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcacaattgttactggtagatgatgaacccggattgagagaagccgtcaaagac
tacttgcaagaaagtggttttagcgttcaagtcgccagtaatgcccgtgagggttgggat
ttgatgcagcaaagcacaccagacctcgtaatttctgatgtgatgatgcctcaggtagat
gggtatcaatttctcaagcaattgcgcgaagacccccgatttcaatcactccccgtggta
tttttaacagctaaagggatgacgagcgatcgcatccaaggatatcaagctggcgttgat
gcttatctacctaaacccttcgacccagatgaactggtagcgatcatcgaaaacttactt
acccgccgcaacagcaagcctccaaaaaccaccgaagaaggcgaaacaccagatatagcc
gaactagccaatcaaattgctcaaatcaaagctttattaactcaaaggaatgcaatttcc
cagtcacctgctccttttaaaattgacctcactcccagagaacagagcgttttaaacttg
gtagctgaaggactaatgaacaaggaaatcgcccgccgtctcgaaaccagcgtgcgtaac
gtcgaaaaatacgtcagtcgtttgttcagtaaaacaggaactaacagccgtactgagtta
gttcgttttgccttggaacacggtctagccaaataa
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