Trichormus variabilis: Ava_0314
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Entry
Ava_0314 CDS
T00277
Name
(GenBank) Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity
KO
K13924
two-component system, chemotaxis family, CheB/CheR fusion protein [EC:
2.1.1.80
3.1.1.61
]
Organism
ava
Trichormus variabilis
Pathway
ava02020
Two-component system
ava02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ava_0314
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Ava_0314
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ava02022
]
Ava_0314
02035 Bacterial motility proteins [BR:
ava02035
]
Ava_0314
Enzymes [BR:
ava01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.80 protein-glutamate O-methyltransferase
Ava_0314
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.61 protein-glutamate methylesterase
Ava_0314
Two-component system [BR:
ava02022
]
CheA family
CheA-CheYBV (chemotaxis)
Ava_0314
Bacterial motility proteins [BR:
ava02035
]
Flagellar system
Chemotaxis proteins
Two component system proteins
Ava_0314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CheB_methylest
CheR
PAS_10
HATPase_c
Response_reg
HisKA
CheR_N
PAS_4
PAS
PAS_9
PAS_8
Motif
Other DBs
NCBI-ProteinID:
ABA19940
UniProt:
Q3MGE6
LinkDB
All DBs
Position
404547..408746
Genome browser
AA seq
1399 aa
AA seq
DB search
MNSSPAKKSQSNTPDEEQQGNENELFPIVGMGASAGGLEAFTELLNNLPSDTGMGFVLIQ
HLVPDQKSLLSEILSQTTQMPVVEVQNGMVVAPNHVYVIPPNTMMTISQGTLYLSPRKKT
RGQVMSIDTFFFSLAEDRGNKAIAVVLSGGDGDGTRGLEAIKAAGGITFAECQESARVSS
MPNTAVASGSVDFILTPQAIAQELANISRHPYIKPTTPEKSTEVIPETGDALHTIFSLLK
AATGVDFNYYKQTTLKRRIFRRMILYKLERLEDYVRYLQENLAEVKALYQDVLITVTNFF
RDPEVFEALKTTVFPQIISREQTPDKPIRVWVAGCSTGEEAYSIAICLLEYLSNQSINTT
IQIFATDINEVAIEKARIGIYKPSQVLDVSPARLQRFFVPVEGGYQISKPVRELCVFARQ
NLISEPPFSRLDLISCRNVLIYLGATVQKKLIPMFHYGLKSTGFLLLGTSETVGEFSDLF
ALVDRKHKIYSRKMAPARLGMDLLASHYPTEPAKPQPPVNEDGWNDLQMQKEADRIVLSQ
YAPVGVIIDNDLEIVQFRGQTSAYLQSPPGRPSFNLLKMAKAELRLELRTAIHQAKKRGI
AVKKEGLLIKDNEQVKLIKFDVVPFKAPGRAERYFLVMFAEMPTAATSMLGVAGDETRQQ
KQTNNAQEINQLKQELASTKEYLQSIIEEQQATNQDLRAANEEILSSNEELQSTNEELET
AKEEIQATNEELNTINDELQRRNIESTQVSNDLQNLLSSINIPILMLGGDLRIRRFTPTA
ERIYNLIPTDIGRPLSDINHNLNISDLEQQIQEVIGTLTFKVQEVQDNEGHWYDLRIRPY
RTMDNKIDGAVVVLVDIDALKRSAEQLRASRDYAEAIVDTMRESLVVLDLNLRVVRANRS
FYETFQIQPTETEQRLIFDIGNGRWNIPQLRSLLEEIPPNITPFQDIEVGHNFEQLGYKT
LRLNARKMPQIDDTQLILLLIEDITQQKQLEAERTQLLAQEHSAREAAETANRAKDEFLS
ILSHELRNPLNTILGWASLLSTHQLEADTVNQGLEAIERSAQAQAHLISDLLDVSRISSG
RLRMDAQPIELIPIIEAAIAVVRLAAEAKNIHIETQLDPTQKTIVGDPIRLQQVIWNLLS
NAIKFTPVRGRIDITLEYTDFHAQIQISDTGQGISPDFLPFIFERFRQADGSRTRSNTGL
GLGLSIVRHLVELHGGTVAAQSPGEGLGATFTIRLPLQTTEGGTSVLNTSDSLASTNKTE
LSTENIASLAGLRVLVVDDEPDIRLLFKLVLEEYGVEVATVGSASAALSTLTGNPNGYDI
LLSDIGLPGEDGYALIRNVRALSPELGGQIPAAALTAYAGYAEYAQALAAGFQMHLAKPV
EPYQLVSLVASLAVGVRGV
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaagtccggcgaaaaaatctcaatctaatacccctgatgaagagcagcagggg
aatgaaaatgaattatttcctattgtgggcatgggggcttctgcgggaggtttagaagca
ttcacagaattactcaacaatttgccaagcgatacagggatggggtttgtgttgattcag
cacttagtcccagatcaaaaaagtctgttgagtgagattttgtctcagacaactcaaatg
cccgtggtagaggtacaaaatgggatggttgtggcaccaaatcatgtgtatgtgattccc
cccaataccatgatgaccatttctcaaggaactttgtacctgagtccccgtaagaagact
cgcggacaagtgatgtcaattgatactttcttcttttccttagcagaggacaggggaaac
aaagctattgctgtggtgttgtcagggggagatggcgatggtaccagaggactggaagca
atcaaggcggctggggggattacctttgctgagtgtcaggaatcggcaagagtgagtagt
atgcccaatactgccgtagcgtctggtagtgtagactttattttgacaccacaagcgatc
gctcaagagttagcaaatatcagccgtcatccttatatcaagccaacaacaccagaaaaa
tcaactgaagtcatacccgaaactggggatgcgctgcacacaatctttagtctactaaaa
gctgctacaggtgttgattttaattactacaagcaaactaccctcaagcggcgtatcttc
cggcggatgattttatataagctggaaagattagaagattatgtgcgttatcttcaggaa
aatctggcggaagtgaaagcactgtatcaagatgtgctaatcaccgtcaccaatttcttc
cgagatcctgaagtctttgaagctttaaaaactacagtatttccgcagattattagcagg
gagcaaactcccgacaaacccattcgagtttgggtagcggggtgttccactggtgaggaa
gcttactccattgctatctgcttactggaatatttgtctaatcaatccattaatacaact
atacagatttttgctacggatattaatgaggtagcaattgagaaagcgagaatcggtatt
tacaagcctagccaagttttagatgtttcgccagcacgcctacagcgcttttttgtgccg
gtggaaggtggttatcaaatcagcaagccagtgcgggaattgtgtgtttttgccagacaa
aatctcattagcgaaccgccattctctcggctcgatttgattagctgtcgcaatgtccta
atttatctaggagcaactgtacagaaaaagttgattcccatgttccactatgggctgaag
tcaacgggctttttattgctaggtacttcagaaacagtaggcgagtttagcgatttgttt
gcactagttgacagaaagcataaaatttattctcggaaaatggctccagctagattgggg
atggatttattagccagtcattatcctacagaaccagcaaaaccccaaccaccagtcaac
gaagatggttggaacgatttacaaatgcagaaagaggctgaccgaattgtcttgagtcaa
tatgctccagtgggtgtaattattgataacgatttggaaattgtccagtttcgcggacag
actagtgcttatctgcaatcaccacccggtagacccagctttaatttgctgaagatggca
aaagcagagttaaggctagaactacgtactgctattcatcaagccaaaaagcggggaatt
gctgtcaaaaaagaaggcttattaattaaagataacgagcaagtcaagctgataaaattc
gatgttgtgccgtttaaagccccaggcagagcagaacgctattttttagtcatgtttgca
gagatgccaacggcagcaacttctatgttaggtgtagctggagatgagactcggcagcaa
aaacaaactaataacgctcaggagattaaccaactcaaacaggagttagccagcactaaa
gagtatttgcaatcaattattgaagaacagcaagccacaaatcaagacctaagagcagct
aacgaggagattctttctagtaacgaagaattacaaagcactaatgaggaactagaaacg
gctaaagaagaaattcaagccaccaatgaagaattaaacacaattaacgacgaactacaa
cggcgcaatattgaatccactcaggtcagtaatgatttacaaaacctcctcagtagtata
aatattcctatcctcatgttgggcggggatttgcgaattcggcgctttaccccaacagca
gagagaatctataacctaattcctacggatatagggagaccattgagtgatattaatcac
aacttaaatatttctgacttagaacagcaaattcaagaagtgataggcaccctcaccttt
aaagtgcaagaagtacaagacaacgaggggcattggtatgatttacgcatccgtccctac
cggacaatggacaacaaaattgacggtgctgttgtggtattggttgacattgacgcgctc
aaacgcagtgctgaacaactgagagcatcccgcgattatgctgaagccatcgttgatacg
atgcgggaatctttggtggtgctggatctaaatttacgggtagtgcgggctaatcgctct
ttctacgagacattccagattcagcctacagaaacagaacaacgcctgatatttgacata
ggtaatggacgatggaatattccccaattgcgatcgctcttagaagagattccgcccaat
attaccccatttcaagatattgaagtagggcataacttcgagcaactgggatacaaaact
ttacggctcaatgcccgaaaaatgccccaaatcgatgatacgcagttaattttgctgctc
attgaagatatcactcaacaaaagcaattagaagcagaacggactcaattactcgctcaa
gagcattcagcccgtgaggcagcagagacagccaaccgcgccaaagatgagtttttatca
attctctcccatgagttgcgaaatcccctcaataccatacttggttgggctagtttgctc
agcacccaccagttggaagcagatacagttaaccaagggttagaggctattgagcgcagc
gctcaagctcaagcccacctcatcagtgatttgttagatgtttcccgcattagctctggt
agactgcggatggatgcccagccaattgaactgataccaataattgaagcagcgatcgcc
gtcgtccgtctagcagcagaagctaaaaacattcacattgaaacccagttagaccccaca
caaaaaaccatagtaggtgatccaattcgcttacagcaggtgatttggaatttactttct
aacgccatcaagttcaccccagtcagaggcagaattgatatcacactagagtacactgac
ttccacgcgcaaattcaaatcagtgatactggtcaaggtatcagccctgactttctcccc
tttatttttgaacgcttccgccaagctgatggcagcagaacccgctccaacactggctta
ggattagggctttccattgtccgccacttagtagaactccacggcggtacagtggcagcg
caaagcccaggtgaagggctaggagcaacctttacaattcgcctacccctacaaactacc
gaaggcgggacatctgtacttaacaccagcgattccttagcttccacaaacaaaaccgaa
ttatcaaccgaaaacattgcctctctcgcagggctgcgggttcttgtggtcgatgacgaa
ccagatatacgtctgttattcaaattagtactggaagaatacggtgtggaagtggcaaca
gttggttcagccagtgccgcactgtcaaccctgacgggaaaccccaacggctatgacatc
cttctatctgacatcggtttaccgggagaagacggttatgcactgattcgcaatgtcaga
gcgctgagtccagaacttgggggtcagattcccgccgccgccctgacagcttatgctggc
tatgcagaatatgcacaggctttagcagcaggttttcaaatgcaccttgctaaacccgtc
gaaccatatcaattagtgtctttagtggcttccttggctgtaggggttaggggggtgtag
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