Trichormus variabilis: Ava_0390
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Entry
Ava_0390 CDS
T00277
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
ava
Trichormus variabilis
Pathway
ava00470
D-Amino acid metabolism
ava01100
Metabolic pathways
ava01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Ava_0390
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Ava_0390
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ava01011
]
Ava_0390
Enzymes [BR:
ava01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
Ava_0390
Peptidoglycan biosynthesis and degradation proteins [BR:
ava01011
]
Precursor biosynthesis
Racemase
Ava_0390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
SUV3_C
Motif
Other DBs
NCBI-ProteinID:
ABA20016
UniProt:
Q3MG70
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All DBs
Position
504016..505203
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AA seq
395 aa
AA seq
DB search
MLSRQQASSMAAHQQCDTYAWFSQRAWVEIDLEALSHNVQQLKQFLSPRTQLMAVVKADA
YGHGAVTVAQTALQAGASCLGVATVPEGIQLREAGMQAPILILGATHTPEQIQAIAQWQL
QPTIGSPKQALIFSNTLETIQHDSPVPVHIKLDTGMSRLGTNWQQAGEFVQLVERLPHLN
IASVYSHLATADSPDPGIMEEQYRRFEEAIAQIKALSIKIPCLHLANSAATLADPRLHYD
MVRVGLAVYGLYPAPHLQKKISLKPVIQVQARVTHVKTIAAGTGVSYGHQFIAPHEMRLA
VVGIGYADGIPRNLSNKMQVLIRGQRVPQIGAITMDQLMIDVSALPDLQEGEIVTLLGKQ
GKEKITADDWAEELNTISWEILCGFKHRLPRVGVM
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgttaagtcgccaacaagcctcaagtatggctgctcatcaacagtgtgatacctatgct
tggttttcacaacgcgcttgggtggaaattgacctagaggcgttgtcgcacaatgtccag
caactgaagcagtttttatcaccgcgtactcagttaatggcggtagtcaaagcagatgct
tatggtcatggtgctgtaacggtggcgcagacagcattacaagcaggtgctagttgtttg
ggtgtcgccactgttccggagggtattcaactgcgagaggcgggtatgcaagcgcccatt
ttgattttaggggctacccatacaccagaacaaattcaggcgatcgctcaatggcaacta
caaccaactattggtagtcctaaacaagctttaatattttccaataccttggagactatc
cagcatgattctcctgtacccgtacatattaagttagatacagggatgtctagacttggg
actaactggcaacaagcaggggaatttgtacagttagtagagcgtttaccccatttgaat
attgctagcgtttactcccacctagcaacagcagatagcccagatccagggattatggaa
gaacagtatagaagatttgaggaggcgatcgctcaaatcaaagctttgagtattaaaatt
ccctgcctgcatttagcaaactcggctgcaaccttggcagatccaagattacactacgat
atggtacgggtaggtttagctgtgtatggactctatccagcccctcatttacagaagaaa
atcagcctaaaaccagtcatccaagttcaggcgcgagttacccacgtcaaaacaattgct
gcgggtactggtgtaagttacggacatcaatttattgccccccatgaaatgcgccttgct
gttgtcggtattggttacgctgatggaataccgcgtaatttatccaacaaaatgcaggtt
ttaattcgtggtcagcgagtaccacaaatcggtgctatcacgatggatcagttgatgata
gatgttagtgctttaccagacctacaagaaggggaaattgtcaccttacttgggaaacaa
ggaaaagaaaaaatcaccgccgatgattgggcagaagagttaaatactatttcctgggaa
attctctgtggatttaaacatcgcctacctcgtgtaggagtgatgtaa
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