Trichormus variabilis: Ava_0523
Help
Entry
Ava_0523 CDS
T00277
Name
(GenBank) succinate dehydrogenase subunit B
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
ava
Trichormus variabilis
Pathway
ava00020
Citrate cycle (TCA cycle)
ava00190
Oxidative phosphorylation
ava00650
Butanoate metabolism
ava00720
Other carbon fixation pathways
ava01100
Metabolic pathways
ava01110
Biosynthesis of secondary metabolites
ava01120
Microbial metabolism in diverse environments
ava01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Ava_0523
00650 Butanoate metabolism
Ava_0523
09102 Energy metabolism
00190 Oxidative phosphorylation
Ava_0523
00720 Other carbon fixation pathways
Ava_0523
Enzymes [BR:
ava01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Ava_0523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_9
Fer4_17
Fer4_10
Fer4_18
Fer4_16
Fer4_7
Fer2
Fer4_2
DUF1062
DUF2225
Fer4_21
Motif
Other DBs
NCBI-ProteinID:
ABA20147
UniProt:
Q3MFT9
LinkDB
All DBs
Position
complement(658639..659631)
Genome browser
AA seq
330 aa
AA seq
DB search
MEVLFKIIRQQQNSAPIVQNYLMETDPGNTILDCLNRIKWEQDGTLAFRKNCRNTICGSC
AMRINGRSALACKENVGSELARLEKISSSANQATNIPEITIAPLGNMPVIKDLVVDMNSF
WNNLEAVAPYVSTAARQVPEREFLQTPDERSRLDQTGNCIMCGACYSECNAREVNPDFVG
PHALAKAYRMVADSRDTSTAERLESYNEGTKGVWGCTRCLYCDSVCPMEVAPLEQITKIK
QEILSQKQASDSRSIRHRKVLVELVKEGGWIDERQFGLQVVGNYLKDLRGLLSLAPLGLR
MIAKGKFPLSFEASEGTAQVRSLIESIQKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggaagttctatttaaaatcattcgtcaacaacaaaattctgctcctattgtgcagaat
taccttatggagacagaccctggtaatactatcttagattgtcttaatcgtattaagtgg
gagcaagacggaacactagcatttcgtaaaaattgccgcaatactatttgtggtagctgt
gccatgcgaattaatggccgttcggctctagcttgtaaagaaaatgtaggtagtgaacta
gctagattagaaaaaatatcatcttcagctaatcaagcaactaacattccagaaattacg
atcgctcctttaggcaatatgccagtaattaaggatttggtcgtagatatgaatagtttc
tggaataatctagaagctgttgctccctatgtaagtacagcagccagacaagtaccagaa
cgggaatttttacaaacaccagatgagcgatcgcgcctcgatcaaactggtaattgtatt
atgtgcggtgcgtgctactcagaatgcaatgcccgtgaagtcaaccccgacttcgtcggc
ccccacgccttagctaaagcctaccgcatggttgcagactcccgcgatactagcacagcc
gaacgcttagaaagttacaacgaaggcactaaaggtgtttggggttgtacccgttgtctt
tactgcgattcagtttgcccaatggaagtagccccattagagcaaattaccaaaatcaag
caagaaatactcagccaaaaacaagccagcgatagccgctcaattcgccaccgcaaggta
ttagtagagctagtcaaagaaggcggatggattgacgaacggcaatttggcttacaagta
gtcggtaactatttaaaagacctcagaggattactcagcctcgctcccctgggtttacga
atgattgccaaaggtaaatttcctctatcctttgaagcatctgaagggacagcccaagtg
cgatcgctcatcgaatcgatacaaaaggagtaa
DBGET
integrated database retrieval system
