Trichormus variabilis: Ava_0709
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Entry
Ava_0709 CDS
T00277
Name
(GenBank) protein translocase subunit secY/sec61 alpha
KO
K03076
preprotein translocase subunit SecY
Organism
ava
Trichormus variabilis
Pathway
ava02024
Quorum sensing
ava03060
Protein export
ava03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Ava_0709
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Ava_0709
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ava_0709
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ava02044
]
Ava_0709
Secretion system [BR:
ava02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Ava_0709
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Motif
Other DBs
NCBI-ProteinID:
ABA20333
CyanoBase:
Ava_0709
UniProt:
Q3MFA3
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Position
883266..884579
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AA seq
437 aa
AA seq
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MISRDKAPTAQETFMQMAQAAGLRGRLLVTVGILILVRLGIFLPVPGIDRTRFAEAISSN
NAIFGLLDIFSGRGLSTLGVFALGILPFINASIIIQLLTAAIPSLENLQKNEGEAGRRKI
SQITRYVTVGWAIFQSLAFSALFLQQFALQPGPVFVAETAIALTAGSMFVMWASELITER
GIGNGASLLIFVNIVASLPKSLGDTIDLVQVGGREIVGRVIVLVLVFLATIVGIVFVQEG
IRRIPIISARRQVGRRVLAEQRSYLPLRLISGGVMPIIFAAAILSLPLLIANFTKNPELA
NIVNTYLSPGGSGSWVYALVYLISIVFFSYFYSSLIVNPVDVAQNLKKMGSSIPGIRPGK
ATSEYIERVINRLTFLGAIFLGLVAIIPTAVERALGVPTFRGLGATSLLILVGVAIETAK
QVQTYVISQRYEGMVKQ
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgatcagtcgagataaagccccaacggctcaagaaacttttatgcagatggcacaagca
gctgggctgagaggcaggctgcttgtaactgtcggtattttaatcctggttcgcctgggt
atatttttaccagtaccaggaattgatagaactcgttttgccgaagcaatttcgagcaat
aatgccatattcggtttattggatatattttcagggcgaggactttcaactttgggagtc
tttgctttagggattttgccttttattaatgcgtcaattatcatccaattactgactgcg
gcaataccatctttagaaaatttacagaaaaatgagggcgaagcgggtcggcggaaaatt
tcccaaatcactcgctacgtaactgtaggctgggcaatttttcagagtctagctttctct
gctctatttctccagcagtttgctttgcaaccaggcccagtatttgtagcagaaacagcg
atcgcattgactgctggttctatgttcgttatgtgggcatcggaactgatcacagaacgt
ggtattggtaacggagcatctttgttgatttttgtcaacattgtcgcatcattaccaaaa
tccttaggtgacaccattgacttagtgcaagttggtggacgagaaattgttggtcgcgtg
attgtgctagtgttagtattcctggcaacaatcgtgggcattgtatttgtacaagaaggc
atccggcgcatcccgatcatctcggctcgtcgtcaagttggtcgtcgggtactagcagaa
cagcgtagctatttacccttacgtctcatctctggtggtgttatgccaatcatttttgca
gcagccatcttgagcttgccacttttgattgctaatttcaccaagaatccagaattggct
aacattgtcaatacttatttgagtccagggggttctggatcttgggtatacgctctggtg
tacttaatttccattgttttctttagctacttctattcttctttgattgttaaccctgtt
gacgtagctcagaacctcaagaaaatgggttctagtattccgggtattcgtcctggaaag
gcaactagtgaatacatcgaacgggtaattaacagactaacttttttgggcgcaatcttt
ttgggtttagtggcaattattcctaccgccgtagaaagagccttaggagtaccgaccttt
agaggattgggtgcgacttcattgctaattctggttggtgtagcaattgagacagctaaa
caagtgcaaacttacgttatttctcagcgttatgaaggaatggtgaaacaatag
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