Trichormus variabilis: Ava_0793
Help
Entry
Ava_0793 CDS
T00277
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ava
Trichormus variabilis
Pathway
ava00470
D-Amino acid metabolism
ava00550
Peptidoglycan biosynthesis
ava01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Ava_0793
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Ava_0793
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ava01011
]
Ava_0793
Enzymes [BR:
ava01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Ava_0793
Peptidoglycan biosynthesis and degradation proteins [BR:
ava01011
]
Precursor biosynthesis
Amino acid ligase
Ava_0793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
KARI_N
2-Hacid_dh_C
NAD_binding_2
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
ABA20417
UniProt:
Q3MF19
LinkDB
All DBs
Position
complement(971948..973315)
Genome browser
AA seq
455 aa
AA seq
DB search
MSKAHVVGLGKSGVAAARLLKREGWEVVLSDRNTSDTLLKQQQELAKEQITVELGYSLDF
AGALPDLIVVSPGVPWDIPALVKARELGIETIGEMELAWRHLKSLPWVGITGTNGKTTTT
ALIAAIFQAAGFDAPACGNIGYAACEVALAATPPDWIIGEMSSYQIESSLTLAPHISIWT
TFTPDHLARHKTLENYYDIKAKLLRQSHLQVFNGDDAYLSKIGASHWPDAYWTSVKGKDY
LIGDKGFYIEDGWVVEQLQPNSSPQRIVAAEALRMVGAHNLQNLLMAVAAARLADIPPNA
IDKAVREFPGVAHRLEHICTWQGIDFINDSKATNYDAAEVGLASVKSPVILIAGGEAKPG
DDAAWLAKIQGQTSAVLLIGNAAPAFAQRLQEIGYSNYEIVETMEQAVRRSLDLAKHHQA
PVVLLSPACASFDQYPNFEARGDHFRQLCLELVGS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagcccatgtagttggattaggaaagtccggtgttgctgcggcgagattgttg
aaacgggaaggttgggaggtagtgctaagcgatcgcaatacctccgataccctcctaaaa
cagcaacaagaactcgctaaagaacaaatcacagttgaattagggtattcgctagatttt
gctggtgctttacctgatttgattgttgtcagtcccggcgttccttgggacattcccgcc
ttagtcaaagcgcgagaattgggcatagaaactatcggcgaaatggaattggcttggcga
catttaaagtccttgccttgggtaggaattaccggcactaatggcaaaaccaccaccacc
gccttaatcgccgctatctttcaagcagcaggattcgatgcccccgcctgcggtaacatc
ggctatgcagcttgtgaagttgccttagcagcaacgcccccagactggataattggggaa
atgagcagctatcaaatagaatcttcccttaccttagccccccacattagtatctggaca
accttcaccccagaccacctagcccgccacaaaacgttagaaaactattacgacatcaaa
gccaagttattacgtcaatcccatctacaagtgttcaatggtgatgatgcttacctatct
aaaataggtgcaagtcattggccggatgcctattggacaagtgtgaaagggaaagattac
ctaattggtgacaaaggcttttatattgaagatggctgggtggtagaacaattacagcca
aactcctcgcctcaaagaattgttgcagctgaagccttacgcatggtaggggcgcacaac
ctgcaaaatctcctcatggcagtagccgcagcccgtttagcagatattccccccaatgcc
attgacaaggcggtgcgagaatttccaggggttgcccatcgcttggaacatatctgcact
tggcaaggcatcgactttatcaacgacagcaaagccaccaactacgatgcggcggaagta
ggtctagcatcggtgaaaagcccagtgattttgattgctggtggtgaagccaaaccaggg
gatgatgcagcttggttagcgaaaatccaagggcaaacatcagctgtattactcattggc
aacgctgcaccagcatttgcccaacgcctacaagaaatcggctatagcaattatgaaatc
gtggagacgatggaacaagcggtaaggcgatcgctagacttagctaaacaccatcaagca
cccgtagtcttactatccccagcctgcgctagctttgaccaataccccaattttgaagca
cggggcgatcattttcgtcaattgtgtctggaattggtagggtcgtaa
DBGET
integrated database retrieval system
