Trichormus variabilis: Ava_0852
Help
Entry
Ava_0852 CDS
T00277
Name
(GenBank) Lipopolysaccharide biosynthesis
KO
K16554
polysaccharide biosynthesis transport protein [EC:
2.7.10.3
]
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ava01001
]
Ava_0852
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ava02000
]
Ava_0852
Enzymes [BR:
ava01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.3 bacterial tyrosine kinase
Ava_0852
Protein kinases [BR:
ava01001
]
Non-receptor tyrosine kinases
Bacterial
Ava_0852
Transporters [BR:
ava02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Ava_0852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GNVR
ParA
CbiA
AAA_31
MipZ
Wzz
Motif
Other DBs
NCBI-ProteinID:
ABA20476
UniProt:
Q3MEW0
LinkDB
All DBs
Position
complement(1039129..1041312)
Genome browser
AA seq
727 aa
AA seq
DB search
MGKGISTLLGVLGRRGFPAVTVFASVIGASFAYLAVTPRLYETSARLMLDDKKASVSELG
RDLTQINSTAIGRNPLADQAELLKSQTVLQLAISKLNPPIKDSSTQKPLTASDIRSNLKV
IIVPATNILDLRYQSPNPNQAAQILNAVSQAMVEENIKTISSEATKVREFLAEKVPIARQ
RLLQAELAETKYRQQSGVVATDDQTRSLVNSLAELENQERILAVQLQETRSRDASLRQVT
DAKNINTAYASVREGQDEQLKVLRTKLTDIETKLIEARTKYQEAHPTVLDLVQQRDEIRA
LYGQQMARVSSSNQTANFNNLSNDQISQTLISDLITNDITRLAVENKLNAIQKMRANIQS
RLALIPIQQQPLTVLTRQREEAAESLKFLQSKLEEAQIAEAQKVSNIRIIETAVAPELPT
SPKRTVVLVIAGFFGSILAVGLVLLLELMDNTLRDATEAEELLQLPLLGVLPRLPATKLS
LEPAEQFLDDLGLVEPYRMLLKNLEFRNVDNLQVIVVSSPLAGEGKSVIVSHLAAVSAML
SRRTLIIDADLRKPSQHTLFNLPPRPGITDVIDGTRPLLSAVQSTTIENLSVLTCGELRG
RPSQILESAAMKALVAEAAQRYDLVIIDTPPLSACADASTLSQMSDGVILTTRPGFTLKE
VLQRAVSELNQNRIPVLGVVVNGMTSGTEKYYRYPSEEYPSILSRPLRRLTSLGSSARNS
ANDSRSN
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaggcatttcaaccttattgggggtcttgggacgcagaggctttccggcggtg
actgtgtttgcatctgtcatcggagcatcatttgcttacttggcggtgacaccacgtttg
tatgaaacatcagcacgattgatgttggatgataaaaaggcgagtgtgtctgaattgggg
cgtgacttgacccagataaactctacagccattggacgtaaccccttagcagatcaggca
gagttactgaagtcacaaacagtcttgcaactagctatttctaaactcaatccgccgata
aaagatagttccacacaaaaaccactaacagcttcggatattcgctcaaatttgaaagtg
attatagtcccagcgactaacattttagatttgagatatcaaagtcccaatccaaatcaa
gcagcgcagattctcaatgctgtatcccaggcgatggtggaggaaaatatcaaaaccatc
agttctgaagctactaaggtcagggaatttttggccgaaaaagtacctatagcgcgtcaa
aggctactacaagcagaactcgcggaaaccaaatacagacagcaaagcggcgttgtcgcc
acagatgatcagaccaggagtttggtaaatagtttagcggaactggaaaatcaagaacgc
atcttggcggtgcaactccaagagacgcgatcgcgtgacgcatctttacgccaagtgaca
gatgcgaaaaatatcaataccgcttatgcctctgtcagagaagggcaagacgaacaactc
aaggtattgcgaactaagttaactgatatcgaaaccaaactcatagaagcgcgtaccaaa
tatcaagaagcccatcccacagttttggatctagtccaacaaagggatgaaatccgggct
ttgtatggacagcaaatggctagggtatcttctagtaaccaaacagctaatttcaacaat
ttatctaatgaccaaattagtcaaacccttatttctgatttaatcacgaacgatattacg
cgtttagccgtagaaaataagctgaatgctatccagaaaatgagagctaatattcaaagt
cgtttggcactcatccccattcaacagcaaccgttaaccgtcttgacacgtcaacgggaa
gaagccgccgaatcactgaagtttctccaaagcaaactagaagaagcgcagattgcggag
gcgcagaaagttagcaacatccgcatcatcgaaacggctgtagccccagagttacccaca
tctccgaaacgtacagtagtacttgtgattgctgggttctttggcagcatcttagcggta
gggttggtattgctactggaactcatggataatactctgcgcgatgcgacagaagcggag
gagttactgcaattaccattgttgggagttttaccccgtcttcctgctaccaaactgagt
ctagaaccggcagaacaatttcttgatgacttgggtttggtggaaccttaccggatgctg
ctgaagaatctagagtttcgcaatgtggacaatttgcaggtaatagttgtcagcagcccc
ctggctggagaaggtaagtcagttattgtttcccatctggctgcggtctctgccatgtta
tctcgacggacattaattattgatgcagatttgcgtaaaccctcacaacataccttattt
aatctacctcccagaccaggaattacagatgtaattgatgggactagacctttactcagt
gcggtgcagtcaacaaccatagaaaatctttcggtgttgacttgcggagagttaagggga
agaccttcccagatcctagagtcagcagcgatgaaagcgctagtggcagaagcagcccaa
cgctacgatttagtcattattgatactccacccttgagcgcctgcgctgatgcttccacc
ttgagtcagatgagtgatggagtcatcctcaccacacgccccggttttaccctgaaggag
gtattacaacgagccgtatcagaactcaaccaaaatcgcattcccgttttgggggtagtg
gtcaatggtatgacaagtggtacagaaaaatactaccgttacccatcagaggaatatccc
tcgatattatctagacctttgagacgtttaacatctctgggtagtagcgccagaaattcc
gctaatgattctaggtcgaactga
DBGET
integrated database retrieval system
