Trichormus variabilis: Ava_0880
Help
Entry
Ava_0880 CDS
T00277
Name
(GenBank) OmpA/MotB
Organism
ava
Trichormus variabilis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Class_2_docking_dom
Motif
Other DBs
NCBI-ProteinID:
ABA20504
UniProt:
Q3MET2
LinkDB
All DBs
Position
1076029..1077822
Genome browser
AA seq
597 aa
AA seq
DB search
MDNDAIDPSSQVSPDHDLSLVKEITKVDDELSKLRSLLLGVEPAKLNHFYELLDNPQIRP
EDISRLLPEAVILRSQQDKQLITAMISIVEEAIQVSVQQDENILSEAFFPVIIPASRKAI
ASLLDEMMQSLNQTLEHSFSLESLQWRLEAKRTGKSFAEIVLLRTLVYRVEQIFLIHKNT
GLLLRHLVASQVTSQDPDLVVAMLTAIQDFIKDSFSVQKTDQLQSLHFGELRIWITEGPQ
ALLAATIRGNPPQELRLGLQTAIEKIHLKLSREMKDFAGDAEPFQVCQPYLESCLISQYK
SASKKSYKYAWTFLGIVAIACGIWSFFAVREQLRWRAYLEELNSQPGIVVTETKQQFGKY
FISGLRDPLASDPHTLLQQTKLNPQTIVSHWQSYLSLEPQLMIKRVNKLLQPPPTASLKI
DQNGVLYAVGSAPRQWILATRKSWSVIPGLTQFQDQDLVESELKELALYQSQIERAIVFF
PEGSQEIIPSELSKLNNLALAVKKLLAVAKYLEKDVYIQIIGHTNTTGTESRNAQLSEGR
SQRVLSYLSSQGISTSQLQVLGVSSSQPLQPELTDEGKKFNRRVSFKVIIMRVERSK
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
gtggataatgatgcaatagatcctagcagtcaagtatcccctgatcatgacttatcctta
gttaaggaaattactaaagttgatgatgaactcagtaaacttcgtagtttgttgttggga
gttgagccagctaagcttaaccacttttatgaactattagataacccacaaatcagacca
gaagatattagccgcttacttccagaagctgtgatcttaagatcgcagcaagataaacaa
ctaattacagccatgatttccattgttgaagaagcgattcaagtttctgttcaacaagat
gaaaatatactttcagaagctttttttccagtcattattcctgcatctcggaaagcgatc
gcctcattgcttgatgaaatgatgcaatcccttaaccaaactctagagcatagtttttcc
ctagaaagtttgcaatggcgactagaagcgaaacgcacagggaaatcatttgcagaaata
gttctactgcggacattagtctatcgagtagaacagatatttttaatacataaaaacaca
ggattattgttgcgacatcttgtagccagtcaagtaaccagccaagacccagatttagtg
gttgcgatgttgactgctattcaagattttatcaaagactcttttagtgttcaaaaaaca
gatcaattgcaaagtttgcattttggagaactgcgaatctggattacagaagggccacaa
gcattattagcagcgacaatccggggtaatcctccccaagaattgagattaggtctgcaa
acagcaattgaaaaaattcatctcaagctgagtagagagatgaaagactttgctggggat
gcagaaccatttcaagtatgtcagccttatttagaatcttgcctaatcagtcagtataag
tctgcgtcaaaaaaaagttacaaatatgcttggacttttttaggtatcgtggcgatcgcc
tgtgggatttggagtttttttgctgtcagagagcaattacgttggcgtgcttacttggaa
gaactcaactctcaaccgggtattgtggtaactgaaaccaaacagcagttcggtaaatat
tttatctctggattacgtgatcccttggcatcagatccccataccttactacaacaaaca
aaactcaatccgcaaacaattgtcagtcattggcaaagttatttatctttagaaccccag
ttgatgataaaaagggtcaataaattactccaacccccacctactgcatcactaaaaatt
gaccagaatggtgttctctatgctgttggctctgcaccccgtcaatggattttagccaca
cgtaaatcatggtctgtcatacccggattaacccaatttcaagatcaggatcttgtagaa
agcgaattaaaggaattggcattataccaaagtcaaattgagcgagccattgtctttttt
ccagaaggttctcaagaaattattcctagtgaattatctaaattaaataacttagcatta
gcagttaaaaaacttttagccgttgctaaatatctagagaaagatgtatatattcaaata
ataggacatactaatacaactggtacggaatcaaggaatgctcaactgagcgaaggacgc
agtcaaagagttttatcttatctatcttctcaaggtattagcaccagccagttacaagta
ttaggagtaagttctagccaacctttgcagccagaattgacagatgaaggtaaaaaattt
aatcgccgagtgtccttcaaggtcataattatgagggttgaacgctcgaaataa
DBGET
integrated database retrieval system
