Trichormus variabilis: Ava_0919
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Entry
Ava_0919 CDS
T00277
Name
(GenBank) Heat shock protein Hsp70
KO
K04043
molecular chaperone DnaK
Organism
ava
Trichormus variabilis
Pathway
ava03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ava_0919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ava03019
]
Ava_0919
03110 Chaperones and folding catalysts [BR:
ava03110
]
Ava_0919
03029 Mitochondrial biogenesis [BR:
ava03029
]
Ava_0919
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ava04147
]
Ava_0919
Messenger RNA biogenesis [BR:
ava03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Ava_0919
Chaperones and folding catalysts [BR:
ava03110
]
Heat shock proteins
HSP70 / DNAK
Ava_0919
Mitochondrial biogenesis [BR:
ava03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
Ava_0919
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
Ava_0919
Exosome [BR:
ava04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Ava_0919
Exosomal proteins of breast cancer cells
Ava_0919
Exosomal proteins of colorectal cancer cells
Ava_0919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
FtsA
ParM_N
DUF7006
Motif
Other DBs
NCBI-ProteinID:
ABA20543
UniProt:
O05714
LinkDB
All DBs
Position
complement(1112438..1114504)
Genome browser
AA seq
688 aa
AA seq
DB search
MGKVVGIDLGTTNSVVAVMEGGKPVVIANAEGMRTTPSVVGFSKDGERVVGQMARRQTVL
NPQNTFFAVKRYIGRRYNELSPESKRVPYTIRKDDVGNIKVACPRLNKEFAAEEISAMVL
KKLADDASAYLGAAVTGAVITVPAYFNDSQRQATRDAGRIAGLEVLRILNEPTAASLAYG
LDRGDTETILVFDLGGGTFDVSILEVGDGVFEVKATSGDTQLGGNDFDKKIVDWLAEQFL
ETEGVDLRRDRQALQRLMEAAEKAKIELSAVSITDINLPFITATEDGPKHLETRLTRSQF
EGLCADLLGRVRNPVKRALKDAGLRPDDIEEVVLVGGSTRMPMVKQLVRDLIGIEPSENV
NPDEVVAMGAAIQAGILAGEFKDVLLLDVTPLSLGLEAIGGVMKKLIPRNTTIPVRRSDI
FSTSENNQNSVEIHVVQGEREMAGDNKSLGRFKLYGIPPAPRGIPQIQVAFDIDANGILQ
VTALDRTTGREQSITIQGASTLSESEVNRMIQEAQKYADVDRERKERVEKRTRSEALILQ
GERQLREVALEFGMQFARNRRQRIDNISRELKESLKENDDRGIDQAYADLQDALYELNRE
VRQYYAEDEDDDLFATIKDIFVGDKDKERDLPRDSYRERDSYNNRDYGRDYGRDYGRDSR
PSYDSNRPPRKSPRPSYQDNWDDDDDWL
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggtagtcggcatcgacttgggtacaaccaactcagtagtcgccgtgatggag
ggtggcaagccggtggtgattgccaatgcagaaggaatgcgaacaaccccctcggtcgtt
ggcttcagcaaagatggtgaacgggtagttgggcaaatggcacggcgacaaacagtcctt
aaccctcaaaatacattttttgccgtgaaacgctacattgggcgcaggtataacgaactt
agcccagaatcgaagcgtgtaccttatacaattcgcaaagatgatgttggcaatattaaa
gtcgcctgtcctcgtctgaataaggaatttgccgccgaagaaatttcggcaatggtgctg
aaaaaattggcagatgatgccagtgcttatttaggtgcagcagttacaggcgcagtcatt
acagtaccagcttattttaatgattctcaaagacaagcaacccgcgatgctggcagaata
gccggtttagaagtgttgcggattctcaatgaaccaacagctgcatccttagcttatggg
ttagataggggtgatacggaaaccatcttagtttttgacttgggtggcggtacatttgac
gtatcaattctggaagttggggatggcgtatttgaagttaaagccaccagtggagatacc
caactgggggggaatgactttgataaaaagattgtggattggttagcagagcaattttta
gaaacagaaggtgtagacttaagacgcgatcgccaagctttgcaacgtttgatggaagct
gcggaaaaagctaaaatcgaactctctgccgtcagcatcactgatattaacttacccttc
attacagccacggaagacggccccaaacatttggaaactaggctgacgcgttcccagttt
gaaggtttgtgtgctgacttattaggacgtgtccgcaaccccgtgaaacgggcgctaaaa
gatgccggactcagacctgatgatattgaagaagtggtactagttggcggttcgacaaga
atgccaatggtaaaacagctagtgcgggacttaattggcattgaacccagcgaaaatgtc
aaccctgatgaagtggtggcgatgggtgcagccattcaagcggggattttggcaggagaa
ttcaaagatgtgctgctgctagatgttacacccttatctttgggattggaagcgatcggt
ggcgtgatgaaaaaactcatcccccgcaatacaactatccccgtccgtcgttctgatatt
ttctccacctccgaaaataaccaaaactccgtggaaattcacgtagtccaaggcgagcgg
gaaatggctggtgataacaaatctctcggacgtttcaaactctacggcattcccccagcg
ccaagaggcattccccaaatccaggtagcatttgatatcgatgccaacgggattttacag
gtaacagctttagatagaaccactggtagagaacagagtatcactattcaaggtgcttct
actttaagtgaatcagaagttaaccggatgattcaagaagcccaaaaatatgctgacgtt
gaccgggaacgcaaagagagagtagaaaaacgtacccgttctgaagctttaattctccaa
ggcgaacgccaacttagagaagtcgctttagaatttgggatgcagtttgcccgtaaccgt
cgccaacgcatcgataatattagccgggaactgaaggaaagtctcaaagaaaatgacgat
cgcgggattgaccaagcttacgccgacctgcaagatgctctatatgagctaaatcgagaa
gttcgtcagtattatgctgaggacgaagacgacgatttatttgccacaatcaaagacatt
tttgtcggcgataaagacaaggaacgcgaccttcccagagatagctatcgagaacgcgat
tcttacaataacagagattatggcagagactatggcagagattacggacgagacagccgt
ccttcctatgacagcaaccgccctcctcgtaaatcaccccgccccagctatcaagataat
tgggacgatgatgatgattggctatag
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