Trichormus variabilis: Ava_0926
Help
Entry
Ava_0926 CDS
T00277
Name
(GenBank) Penicillin-binding protein 1A
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
ava
Trichormus variabilis
Pathway
ava00550
Peptidoglycan biosynthesis
ava01100
Metabolic pathways
ava01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Ava_0926
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Ava_0926
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ava01003
]
Ava_0926
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ava01011
]
Ava_0926
Enzymes [BR:
ava01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Ava_0926
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Ava_0926
Glycosyltransferases [BR:
ava01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Ava_0926
Peptidoglycan biosynthesis and degradation proteins [BR:
ava01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Ava_0926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
ABA20550
UniProt:
Q3MEN6
LinkDB
All DBs
Position
1120359..1122281
Genome browser
AA seq
640 aa
AA seq
DB search
MSSRTFEQKQPQRRTSSGFEFFKGVGQIAGGTLLSLTMLTSSIVAGGLVGLAISFRNLPD
VRQLRNFFPSETTYIYDIKGKLLASVHGEANREVVPLDRISPNLKRAVLASEDSHFYYHH
GINPTGVGRAVVTNLVAGGVKEGGSTITMQLVKNLFLTRKRAFTRKLAEGVLAIRLEQIL
TKDQILEMYLNQVYWGHNNYGVQTASRSYFNKSAENLTIAESAMMAGLIQAPEEFSPFAS
KKLAKQKQKEVLGRMLELNWITQKEYDDALKEELTFGRIRSFQGSALPYITNTVSQELAK
KFGRETLLKGGMRVQTTVDANFQTMAEDTVKKWHKTLLGEGLSRNQIALVAIDPRTHFVK
ALVGGVDSRASEFNRATQALRQPGSSFKPFVYYAAFATGKFAPDSTVIDAPVRYRDGDNW
YSPRNYDGGFSGAMSIRTALAQSRNIPVIKLGKTIGMNKVVETCRILGIMSPMEPVTSLP
LGAIGVTPLEMASAYATFANYGWQSPPTVIARITDSSGNVLLDNTPKPQLVLDPWASAAI
IDVMRSVVTDGTGKGAAIDRPAAGKTGTTSSEKDIWFVGTVPQLTTAVWIGRDDNRQLAS
GATGGGKVAPIWRDFMTKALKGVPVQNFKPPSQFPRPKAN
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtctaggacttttgaacaaaagcaaccgcaacgtcgtacttcgtcgggatttgag
ttttttaaaggagtaggccagatagctggcggcactcttttatcactgacgatgttgaca
agctccattgtagctggagggcttgttggtttagcgatcagtttccgcaatttaccagat
gtcagacagctacgtaatttcttcccatcggaaacaacttacatctacgacattaaaggc
aaactactagctagtgtccacggggaagccaaccgcgaagttgtaccgttagatcgaatt
tcccccaatctgaaacgggctgtactcgccagtgaagatagtcatttctattatcaccac
ggtattaaccccactggtgtagggcgtgctgtcgtcactaacttggtggcgggtggtgta
aaagaaggtggttctaccatcaccatgcagttggtgaagaacctctttttgactcgtaaa
cgcgcttttactaggaagttagcggaaggagtgctggcaatccgcttagaacaaattctt
actaaagaccaaattttagaaatgtacctcaatcaagtgtattggggtcacaataattat
ggtgtgcaaacagcatcacgtagttactttaataagtcagccgagaatttaacgatcgct
gaatcggcgatgatggcgggtttaatccaagcaccagaagaatttagcccctttgccagt
aaaaaattggcaaaacaaaaacaaaaagaagtactggggcggatgctggaattgaactgg
attacccagaaagaatatgatgacgctctcaaggaagaacttacattcggcagaattagg
tcatttcaaggtagtgcgttgccatatataaccaacactgtgtcccaggaactagcgaaa
aagtttggtcgtgaaaccttgttgaagggtggtatgcgggtacaaactactgtcgatgct
aatttccaaacaatggcagaagacactgtgaagaaatggcataaaactctacttggtgaa
ggattaagtagaaatcaaattgccctggtagctattgaccccaggactcattttgtcaaa
gccctagtcggtggcgtagactctagagctagtgagtttaacagggctacacaagctcta
cgtcaaccgggatcttcctttaaaccgtttgtttactatgctgcttttgctactggtaaa
tttgcacctgatagcacggtgatagatgccccagtgagatatcgtgatggtgataattgg
tatagtcctagaaactatgatggtggctttagcggtgccatgtccattcgcactgcccta
gcacaatcacgtaacattcccgtgattaaactgggtaaaaccatcggtatgaataaagtt
gtggaaacttgccgcattttaggaatcatgagtccgatggaacctgtgacctctctgccg
ctaggggcgattggtgtcacgccactggaaatggctagtgcttatgcgacttttgccaat
tatggttggcaatcaccaccgacagtgattgcgcggattactgatagtagtggcaatgtg
ttgttagataatactcccaaaccccagttagtgttagatccttgggcatcggcagcgatt
atcgatgtgatgcgatcagttgttactgatggtactggtaaaggtgctgcgatagatcgc
ccggctgcggggaaaacgggtacaacctcatctgaaaaagatatttggtttgtgggtact
gtaccgcagttaacaactgctgtctggataggcagggatgacaaccggcagctagccagt
ggcgcaactggtggtggtaaggttgctcctatctggcgtgattttatgactaaggcactc
aagggcgtaccagtgcagaacttcaagccgccttctcaatttccgcgtcctaaggcgaat
taa
DBGET
integrated database retrieval system
