Trichormus variabilis: Ava_0936
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Entry
Ava_0936 CDS
T00277
Name
(GenBank) succinate dehydrogenase subunit A
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ava
Trichormus variabilis
Pathway
ava00020
Citrate cycle (TCA cycle)
ava00190
Oxidative phosphorylation
ava00650
Butanoate metabolism
ava00720
Other carbon fixation pathways
ava01100
Metabolic pathways
ava01110
Biosynthesis of secondary metabolites
ava01120
Microbial metabolism in diverse environments
ava01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Ava_0936
00650 Butanoate metabolism
Ava_0936
09102 Energy metabolism
00190 Oxidative phosphorylation
Ava_0936
00720 Other carbon fixation pathways
Ava_0936
Enzymes [BR:
ava01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Ava_0936
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Thi4
GIDA
HI0933_like
Pyr_redox_2
Lycopene_cycl
FAD_oxidored
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
ABA20560
UniProt:
Q3MEM6
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All DBs
Position
1129011..1130747
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AA seq
578 aa
AA seq
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MVNMLEHDVIIVGGGLAGCRAAVEIARTDPSLNVAVVAKTHPIRSHSVAAQGGMAASLKN
VDSSDTWEAHAFDTVKGSDYLADQDAVAILTQEAPDVVIDLEHMGVLFSRLPDGRIAQRA
FGGHSHDRTCYAADKTGHAILHELVNNLRRYGVHIYQEWYVMRLILEENEAKGLVMYSLL
DGHIEVVRAKAVMFATGGYGRVYNTTSNDYASTGDGLAMSAIAGLPLEDMEFVQFHPTGL
YPVGVLISEAVRGEGAYLINSEGDRFMATYAPSRMELAPRDITSRAIAYEIRAGRGVNLD
GSPGGPFVYLDLRHMGKEKIMSRVPFCWEEAHRLVGVDAVTQPMPVRPTIHYCMGGIPVN
TDGRVRSSGDGLVEGFFAAGETSCVSVHGANRLGSNSLLECVVYGKRTGAAIAQYVQNRK
LPAIDEQRYVKQAQQEIQALLEQPGEYRINQVRQAFQDAMTDYCGVFRTQDLMSQGWQKI
TEIQQKYSQIYLDDKGSCWNTELVEALELRSLMIVGQMILASALNRQESRGAHFREDYPQ
RDDTKFLQHTMAYYSPAGIDIQYRPVTITMFQPQERKY
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggttaatatgctagagcatgatgtgattattgtcgggggtgggctggcgggatgtcgg
gcggctgtggaaattgcccgtactgaccctagtttaaatgtggcggtggttgccaaaact
caccccattcgttcccactctgttgcagctcaaggtggtatggctgcatcactgaagaat
gtcgattcttctgatacttgggaagctcacgcttttgatactgtcaaaggttctgattat
ttagcagaccaagatgctgtggcaattctgactcaggaagccccagatgtagtgatagac
ctggaacatatgggggttttgttctcacgtctccctgatggccgcattgctcaacgggct
tttggtggacactcccacgatcgcacctgttacgcagctgataagactggtcacgctatt
ctacatgagttggtaaataatttgcggcgttatggtgtgcatatttatcaagagtggtac
gtgatgcgcctgattttagaagaaaatgaggcgaagggtttagtcatgtacagcctgtta
gacgggcatattgaggttgtccgggctaaggcggtgatgtttgccaccgggggttatggt
cgcgtttataacactacttctaacgattatgcctctactggtgatggcttggcgatgagt
gcgatcgctgggttacctctggaagacatggagtttgtccaattccatcccacgggtttg
tatccagttggtgtcttgatttccgaggctgtgcggggagaaggggcgtatttaattaat
agtgaaggcgatcgctttatggcgacttatgcacccagtcgtatggaactagcaccccgc
gatattacctcacgggcgatcgcttatgaaattcgggctggacgtggtgtcaatttggat
ggcagccctggtggcccctttgtctatctggatttacgccacatgggcaaggaaaaaatt
atgagtcgcgtccccttctgttgggaagaagcccaccgcctagtcggtgtggatgcagtc
actcaaccaatgccagtccggccgacaattcactattgtatgggtggtatccctgtaaat
accgatggtagagtccgcagcagtggcgatggcctggttgaagggttttttgcggctggt
gaaacatcttgtgtatctgtccacggggcaaatcgtctcggtagtaattctttattagaa
tgtgtagtttatggtaaacgaactggggcggcgatcgctcaatatgtacagaaccgtaaa
ttacctgccatagatgaacaacgttacgtcaaacaagcccagcaagaaattcaagcttta
ctggaacagccaggagagtatcgaatcaatcaagtccgtcaagcttttcaagacgcaatg
acagattactgtggcgttttccgcactcaagatttaatgagtcaaggttggcaaaaaatc
acagaaatacaacaaaaatacagtcaaatatacttagatgataaaggcagttgttggaat
actgaactagtagaagctttagagttgcggagtttaatgatagtcggacagatgatttta
gcctcagctttaaatcgtcaagaaagtcgtggcgcacacttccgcgaagattacccacag
cgagatgataccaagttcctgcaacacacaatggcttactattcacctgcggggattgac
attcaatatcgcccagtgacaattaccatgtttcagccacaggagaggaagtattag
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