Trichormus variabilis: Ava_1016
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Entry
Ava_1016 CDS
T00277
Name
(GenBank) circadian clock protein KaiC
KO
K08482
circadian clock protein KaiC
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
Ava_1016
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
AAA_16
DnaB_C
AAA_22
AAA_14
SLFN-g3_helicase
PAXNEB
GvpD_P-loop
AAA_7
T2SSE
TrwB_AAD_bind
Rad51
Arb1
MEDS
Motif
Other DBs
NCBI-ProteinID:
ABA20640
UniProt:
Q3MEE6
LinkDB
All DBs
Position
complement(1226765..1228324)
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AA seq
519 aa
AA seq
DB search
MSEKEQPEQQNTSGNGVEKIRTMIEGFDDISHGGLPVGRTTLVSGTSGTGKTLLSLQFLF
NGISFFDEPGVFVTFEESPSDIIKNAHIFGWNLQRLINEGKLFILDASPDPEGQDIVGNF
DLSALIERLQYAIRKYKAKRVSIDSITAVFQQYEAVGVVRREIFRLVARLKQLNVTTIIT
TERSEEYGPVASFGVEEFVSDNVVIARNVLEGERRRRTIEILKLRGTTHMKGEYPFTITN
DGVNIFPLGAMRLTQRSSNVRVSSGVKTLDGMCGGGFFKDSIILATGATGTGKTLLVSKF
LQNGCVNNERAILFAYEESRAQLSRNAYSWGIDFEELESQGLLKIICTYPESTGLEDHLQ
IIKSEIAYFKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGFFTNTTDQFMG
SHSITDSHISTITDTILMLQYVEIRGEMSRAINVFKMRGSWHDKGIREYNITADGPEIQD
SFRNYERIVSGSPTRVSIDEKAELSRIVRRFEDKQGSDS
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaaagagcagccggaacaacaaaatacatctggtaatggtgtagaaaaaatt
cgcacaatgattgaaggctttgacgatattagtcatggcggcttacctgttggtagaact
acgttagtcagtggaacctctggaacaggcaaaactttattatctctacagtttctcttt
aacggtattagcttctttgatgaaccaggtgtatttgtcacctttgaagaatcgcccagc
gacatcatcaaaaatgctcatatttttggctggaacttacaacgcctaattaatgagggt
aaattatttattctggacgcatctccagacccagaaggccaagatatcgttggcaacttt
gatctttccgcattaattgagcgcttgcaatatgcaattcgtaaatacaaggccaaacga
gtatccatcgactccatcaccgccgtattccagcaatatgaagcagtgggggttgtacgt
cgagagatttttcgcctagtagcgcgtctcaaacaactcaatgtcactacaataattacc
accgaacgcagcgaagaatatgggccagtagcctcctttggtgtagaggaatttgtatcc
gataacgtggtcatagcccgtaacgttttagaaggagaacgtcgccgccgcaccattgaa
atattgaaattgcgtggtacaactcacatgaaaggtgagtatcctttcacaattaccaat
gatggtgtgaacattttcccattaggagcaatgcgcttgactcaaaggtcttctaatgtc
cgggtttcttctggtgtcaaaactctagatggaatgtgcggtggtgggttctttaaagac
tcaatcattttagccacaggggctaccggtacgggtaaaaccctgttagtgagtaaattc
ttacaaaatggctgcgtcaacaacgagcgagcgatattattcgcttatgaagaatcacgc
gctcaactatctcggaatgcttattcttggggtattgattttgaagaattagaaagccaa
ggtttactgaagattatttgtacctacccagaatcaactgggttagaagaccacctgcaa
attattaagtccgaaattgcctattttaaaccagcaagaattgctattgattccctatca
gcactagctagaggtgtaagtaataatgctttccggcagtttgttattggtgtcacaggt
tatgccaaacaagaagaaattacgggcttctttactaacacaactgaccaatttatggga
tctcattccataaccgactctcacatctctacaattaccgacacaatcttaatgctacag
tacgtagagattcgtggggaaatgtcaagggcaattaacgtatttaagatgagaggttcc
tggcacgacaaaggaattagagaatataatatcacggcagatggtccagaaattcaagat
tctttccgtaactacgaaagaattgtcagtggctctccaacccgcgttagtattgacgag
aaagcggaactttctcggatagtccgacgttttgaagacaaacagggttccgattcctaa
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