Trichormus variabilis: Ava_1030
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Entry
Ava_1030 CDS
T00277
Name
(GenBank) response regulator receiver modulated diguanylate cyclase
Organism
ava
Trichormus variabilis
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
Response_reg
GGDEF_GdpP
Cas10-Cmr2_palm2
DUF2175
Motif
Other DBs
NCBI-ProteinID:
ABA20654
UniProt:
Q3MED2
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Position
1253239..1254231
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AA seq
330 aa
AA seq
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MKNTVPESPSLILIVDDEPFIRAQLRLSLQCEGYRTAEAEDGRKALTIFQELQPDIVLLD
AIMPDLDGFECCTRLQLLEDGKYTPVLMITGLEDQESVDRAFEVGAIDYVTKPIHWPVLR
QRVKRLIQQSHLQQKLEAANRELQRLVTIDELTQVANRRRFEEYCAQEWQRMARDQLPLS
LILCDVDFFKAYNDTYGHRAGDRCLQLVAKAIENCVNRPADVVARYGGEEFAVILPRTYP
EGAIHLANAICSAVRELQIPHLTSQANTCVTISAGVATEIPVPNSDFQEIIDAADRALYQ
AKMAGRDRCQQYIKQSSSPVYFLNAHHRLA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatacagttccagaaagcccgtccctcattctcattgttgatgatgaaccgttc
atccgagcgcagttgcggctttctctacaatgtgaaggctatcgcacagccgaggctgaa
gatggtagaaaggctttgactatttttcaagaactgcaacctgatatagtactgctggat
gcgattatgcctgacctggacggctttgagtgttgcactcgtttgcagctactagaagat
ggtaaatacacaccagtcttaatgattactggactagaggatcaagaatcagttgatcgg
gcatttgaggtgggagcaattgattatgttaccaaacctattcactggccagttttgcgt
caacgggtcaaacgtttaattcagcaatcccatctccaacaaaagctagaagcggctaac
agagaattgcaaaggttggtgacgattgatgagttaactcaagtagccaaccgccgcaga
tttgaggaatattgcgctcaagagtggcaacgtatggcgcgggatcaactacccttatct
ctgattctttgtgatgtcgatttttttaaagcttacaacgatacttatggtcatcgggcg
ggcgatcgctgtttacaattggtggcaaaagctattgaaaactgcgttaatcgaccggct
gatgtagtcgctcgttatgggggcgaagaatttgctgttatcctacccagaacatatcct
gagggagctattcatttagctaacgccatctgctctgctgttcgagaattgcaaattccc
catctgacttctcaagctaatacttgtgtcaccattagtgctggggtagctacagaaatt
cctgtacccaactctgattttcaagaaattatcgatgctgccgatcgcgccttatatcaa
gctaaaatggccggacgcgatcgctgtcaacaatatattaaacaatcatcttctcctgtt
tattttttaaatgctcatcatcgactggcttga
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