KEGG   Trichormus variabilis: Ava_1158
Entry
Ava_1158          CDS       T00277                                 
Name
(GenBank) Restriction modification system DNA specificity domain protein
  KO
K01154  type I restriction enzyme, S subunit [EC:3.1.21.3]
Organism
ava  Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:ava00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ava02048]
    Ava_1158
Enzymes [BR:ava01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Ava_1158
Prokaryotic defense system [BR:ava02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Ava_1158
SSDB
Motif
Pfam: Methylase_S
Other DBs
NCBI-ProteinID: ABA20782
UniProt: Q3ME04
LinkDB
Position
complement(1418019..1419383)
AA seq 454 aa
MMKRKTPTIDEHLHEFKISNKTDESYKNRDFGFVPESWKIVKFENILSIFNGYAFKSTDA
VDSSNTQLIRMGNLYQNKLDLERSPVFYPDYYAQKYSKYLLKEGDLIISLTGTSEKEDYG
FTVKINRTDKNLLLNQRVARIDVISADINHDYIFYFLRSRIFLTPLYLTAKGMKQANLST
NTIKTLNVLIPPLEEQRKIAWILSLVQDAITQQEQIISLTTELKKVLMQKLFTEGTRGEP
QKMTEIGFIPKSWEVIRFADAISVTSGQVNPKEKPYSEMLHVGSENIESNSGRLLCLQTN
QELNISSGNYYFNNDDILYSKIRPYLNKVALPDFEGTCSADMYPIRSKNGCFNRNFLFHF
LLSDIFRNQAISFQDRTGIPKINRAQLGSTLLIRPSLLEQNEISYALDLCDKRINTAYQN
LSTSKDLFRILLHQLMTAQIRVDDLNLSALNLVS
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgatgaaaagaaaaactcccacaattgatgaacatcttcatgaatttaaaataagtaat
aaaacagatgagtcttataaaaatagagattttggtttcgttcctgaaagttggaaaata
gttaaatttgaaaatatcttaagtatttttaatggatatgctttcaaatctaccgacgct
gtagattcttccaacactcaactaataaggatgggaaacctatatcaaaataaacttgac
ctagagcgcagtcctgttttttatcctgactattacgcccagaaatattctaagtatctt
ctaaaagagggagacttaataatatcattaactgggactagcgaaaaagaagattatggt
tttacagtcaaaataaatagaactgataaaaatttactgctaaatcaacgtgtagcaaga
attgatgttatttcagcagatattaatcatgactacattttttactttctacgatccaga
atatttttaacccctttgtatttaacggcaaaggggatgaaacaagctaatttatcaaca
aatacaattaagacattaaatgttttaattcctcctctggaagaacagcgaaaaattgca
tggattttgtcactggtgcaggatgcgatcacacaacaggagcaaattatctccctcact
accgaactgaaaaaagtcctaatgcagaaattattcaccgagggaactcgtggtgaacct
caaaagatgacggaaataggctttattcctaaaagttgggaggttattagatttgctgat
gctatcagtgtcacaagtggtcaggttaatcctaaagaaaaaccttatagcgaaatgctt
catgttggctctgaaaatatagaatctaatagtggaaggctattatgcctgcaaacaaat
caagaattgaatatttcaagtggcaactattattttaataatgatgatattctttattca
aaaatccgaccttatttaaataaggtcgcattacctgactttgaaggaacttgtagtgct
gatatgtatcctatccgctcaaaaaatgggtgttttaatcgtaattttttatttcatttt
cttttgtctgatatttttagaaatcaagcaatatcttttcaagatagaactggtattcct
aaaattaatagagcgcagttaggctcaactcttttaataagaccttcattattagagcaa
aatgaaattagttatgctcttgatctatgtgataaaagaataaatacagcgtatcaaaac
ctatctacatcaaaagacctatttcgcatccttcttcaccaactcatgactgcccaaata
cgagttgatgaccttaatctttctgccctcaacctcgtatcatag

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