Trichormus variabilis: Ava_1231
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Entry
Ava_1231 CDS
T00277
Name
(GenBank) transcriptional regulator, TetR family
Organism
ava
Trichormus variabilis
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Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_7
RHH_1
RHH_4
MatP_C
Motif
Other DBs
NCBI-ProteinID:
ABA20855
UniProt:
Q3MDT1
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Position
complement(1516831..1517700)
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AA seq
289 aa
AA seq
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MSKKKAHIETNHADRLPSAEKVDAILNGAMQEFLTHGYAATTMDRVTAAAGVSKTTVYSY
FQDKEGLFAALIEKLAQEKCFLMHNPELLQGEPHIVLRRLATNIFNQVEQEPEFLSLVRL
IIGESGRFPSLAKTFVCNIDKQALQRLSEYFTEHSELKLPDPEVAARIFLGTVVHFIILQ
YMLHSQDILPMESDRLIDNLINLITINLSQNTSTNQYSGTRQKSPRRRRTASGKFQMDYA
SEPKQLRSIRLTNTAWEQLAELAEKNNLTRSEMIEIFARQGFSGNHTNS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaaaaggcacatatagaaactaatcatgccgaccgcttgccgtcagcagaa
aaggttgatgcaattctcaacggtgcgatgcaagaatttttgacccacggatatgcagct
acaacaatggatagagtgacagccgcagccggagtctcgaaaaccactgtctacagctac
tttcaagacaaagaaggattatttgctgctttgattgaaaaactagcccaggaaaaatgt
tttttaatgcacaatcctgagcttttgcaaggagaaccccatattgttctacgccgttta
gcaacaaatattttcaatcaagtagagcaagaaccagagtttttgagtttagtcaggcta
attatcggcgaatctgggcggtttccatccttagcaaaaacctttgtctgcaacatagat
aaacaagctctacagaggctaagtgaatattttacagagcattcagaactaaaattacct
gatccagaggtagcagcacgtatttttcttggtacagtagtgcattttataattcttcaa
tatatgctccatagtcaggatatcttgccaatggagagcgatcgcctgattgacaatctg
attaatttaatcactattaatctttctcaaaatacttctactaatcagtattctggtaca
aggcagaaatccccaaggcgcaggcgtacagcttcgggtaaattccagatggactacgct
tcagaacccaaacagttaaggtccataagattgacgaatacagcctgggaacaattggca
gaattagcagagaaaaataatttgactcgcagtgaaatgattgaaatctttgcccgccaa
ggtttttcaggcaatcacactaactcgtaa
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