Trichormus variabilis: Ava_1255
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Entry
Ava_1255 CDS
T00277
Name
(GenBank) Predicted sensor protein
Organism
ava
Trichormus variabilis
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Gene cluster
GFIT
Motif
Pfam:
DICT
CHASE6_C
HD_5
HD
Motif
Other DBs
NCBI-ProteinID:
ABA20879
UniProt:
Q3MDQ7
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Position
complement(1544789..1546183)
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AA seq
464 aa
AA seq
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MLEGSILQQLEASHRHSTRPVRFGVYYKNTLVALCHALEDHILADDNSPLVITAFQRGKW
YLQEAERYADIAQCSRQIAIMAAPDAGFAEHPTSQLPNVNLVPLDPSDPVAQEWHLIILS
PKYTAMVLCQELSDADYGVGGRPASDVERKFYGLWTFEPELVKETAELAIAHIQKYNPEL
AAKLLIHAQGIENYVSTSEDLSIVVSRVVDYLQTGQEQLSIPAAVRQQALDSNLVSNEIQ
AFLRMAQLMDLADITNPQAAAEVATLAETLAQLLDLPAWQIKRLKLAGLLHRIDPLQKAE
SIFTPGTSTHHQESAPSCPLTCSLVPGAQALRKMSRLRAVAQIITHQTEWWDGTGEPAGL
AGDEIPLESRILALVADFQWQVNQKRTASENRQEIFVQALEECRQQANRFDPKLIDALFL
LVMGLQQGLDLPLMTPKVSTGMWLLDSRWDSQNKTSEEMSSYPQ
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaggttcaattctacaacagctagaagcgtcccatcgccacagcaccagacca
gtccgattcggggtgtattacaaaaataccctggttgcgctttgtcatgctttagaagac
catatattggcggatgataattcacctttagtaattactgccttccaacggggtaagtgg
tatttgcaagaagctgaaagatatgcagacatcgctcagtgcagtcgccaaattgctatc
atggcagcgccagatgcaggctttgctgaacatcccactagccaactgccaaatgtcaat
ttagtccctttagatccatccgacccagtagctcaagaatggcatttgattattttgtcg
cctaagtacacagcaatggtactttgtcaagaattatctgatgctgattatggagtaggt
ggcagaccggcttctgatgtagagcgtaaattttatggcttgtggacttttgagccagaa
ttagtaaaagaaacggcagagttagcgatcgcccatattcaaaaatacaacccagaatta
gcagcaaaactcctcattcatgctcaaggaattgagaactatgtcagcacttcagaagac
ttgagtatagtcgtttcccgtgttgtagattacctgcaaacaggacaagagcaattatct
attcctgctgccgttcgtcagcaagccttagatagcaacttggtttccaacgaaatccag
gcatttttgcggatggcacagttgatggatttggctgatatcaccaatccacaagccgcc
gccgaagtggcaaccttagcagaaactttggcacagcttttagatttacctgcatggcag
attaaaagattaaaactagcaggattattgcaccgaatagatccactgcaaaaagcagag
agtatttttacacctggaacttccacacaccaccaagaatcagcccccagttgtccatta
acttgctctttagtcccaggagcgcaagcattacgcaaaatgtcaagattacgggcagta
gctcaaattattactcatcaaactgagtggtgggatgggacgggggaacctgcgggttta
gctggtgacgaaattcctctagagtcgagaattttggctttagttgcagactttcagtgg
caagttaaccaaaaaagaacagctagtgaaaatcggcaagagatatttgtacaagccctg
gaagaatgccgacagcaagcaaaccgctttgaccctaaactaatagatgccctgttttta
ttagtcatgggtttgcaacaaggactcgacctacccctaatgacaccaaaagtcagcaca
ggtatgtggctacttgattcccgatgggatagccaaaacaagactagtgaggagatgagt
agttacccgcaatga
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