Trichormus variabilis: Ava_1316
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Entry
Ava_1316 CDS
T00277
Name
(GenBank) Heat shock protein Hsp70
KO
K04043
molecular chaperone DnaK
Organism
ava
Trichormus variabilis
Pathway
ava03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ava_1316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ava03019
]
Ava_1316
03110 Chaperones and folding catalysts [BR:
ava03110
]
Ava_1316
03029 Mitochondrial biogenesis [BR:
ava03029
]
Ava_1316
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ava04147
]
Ava_1316
Messenger RNA biogenesis [BR:
ava03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Ava_1316
Chaperones and folding catalysts [BR:
ava03110
]
Heat shock proteins
HSP70 / DNAK
Ava_1316
Mitochondrial biogenesis [BR:
ava03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
Ava_1316
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
Ava_1316
Exosome [BR:
ava04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Ava_1316
Exosomal proteins of breast cancer cells
Ava_1316
Exosomal proteins of colorectal cancer cells
Ava_1316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
BcrAD_BadFG
Motif
Other DBs
NCBI-ProteinID:
ABA20940
UniProt:
Q3MDJ6
LinkDB
All DBs
Position
complement(1614825..1617038)
Genome browser
AA seq
737 aa
AA seq
DB search
MGKAIGIDLGTTNSVGAFKLAEVEVVTANDNTPPDRKLTRSLVAYDQDKLLVGNQAYNQL
RADPENVIVSIKRLIGRGFSDQAVKKQKSEVGYKISEPSYGTDNSIAVWLGGKEYSPEDI
SAEILKKVVSNAQAYRQGIGKIDEVIDQAVITIPAYFNDQQRHATRTAALKAGLTPLELL
PEPTAAAISYGFSPDSEDVKTILVYDFGGGTFDASLITAAGTSFIEQGKAGDLWLGGDDI
DSQMMSFVKTQVAQEERITDIDGLIAKMPHYQRLRFNADLKMAVERAKVELSSAQVARIS
PATQLLDELGIAIPIEVEITRQQFEAMIGDLVDRSVQICRLALQDAEYHLEMVDIVLLVG
GSSQIPLVQRKVKEAFGNNKVVLHPRPMYAVAEGAAIVAAGQTDKVTTVSRDYYIKLLDD
RYKVINRNDILPVITSHTFKTVADGQRLIHFQFFSPDQVREELDGVDKKESIGDMWLGLN
EVYPKGTEILVNLELDEKNSALKMTATLKNDPAERVSCTFSRGRSDEKIYRELEVAIAEL
NNQDLTQLGVEEALKLAVPVVKLANSIIDPKTEEERIDKREDAQVSLQKFQVSMSKEALD
AESLMNECDRIVQICGFLIPPPQKERLQKLSQDLQGSINAHDLSRMESYSEDARRELDHL
PNEVQVIQASLLAIRQARQVAPTKASAMSDKLYRLLEAMESGNPQESDRLWQELQPDVKL
WLNQELPSNMIATGISR
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggcaatcgggattgatttgggaacaactaattctgttggtgcgtttaagtta
gcggaagtagaagtggtgacagctaacgacaacacaccaccagatagaaaattgacgcga
tcgcttgttgcctatgaccaggataaattattggtaggaaatcaggcttacaatcagtta
cgggctgaccctgaaaatgtgattgtttccattaaacggttaataggtaggggttttagt
gaccaagcagtcaagaaacaaaagtcagaggttggctacaaaattagtgaacctagctac
ggaaccgataacagcattgcggtttggctaggaggtaaggaatacagtccagaggatatc
tcggctgagattctgaaaaaagtcgtatctaatgcccaagcttatcgtcaaggaattggc
aaaatagatgaagtaattgaccaagcggtgattactatccctgcctatttcaacgaccag
caacgccacgccacccgtaccgccgccctcaaagcgggactgacgccgttagaattacta
ccagaaccgacggctgctgccatatcctacggtttttcgccagatagcgaagatgtgaag
acgattttagtttacgactttggtggcggtacatttgatgcttccctgattaccgcagcc
ggtacttcatttattgaacaggggaaagcgggagatttatggttaggtggggatgacatt
gattctcagatgatgagctttgtgaaaacccaagtcgcccaggaagagagaattaccgat
attgatggcttaattgccaaaatgcctcactaccaaaggctaagatttaacgccgacttg
aaaatggcagtagaacgtgccaaggttgaattaagtagcgcccaagtagccaggattagc
ccagcaactcaactacttgatgaattaggtattgccatccccattgaagtagaaattact
cgccagcaatttgaggcgatgattggagacttggttgatcgttcagtgcagatttgccgc
cttgccttacaagatgcagaatatcacttggaaatggtggatatagtgctgttggtgggg
gggtcttcccaaattcctttagtacaacgcaaagttaaggaagcttttggtaataataag
gtggttttgcatccccgtccgatgtatgcggtggcggaaggtgcggcgattgtggctgct
gggcaaacggataaagtcaccaccgtgtcccgtgattactacatcaagttactagacgat
cgctataaagtgattaaccgcaatgatattctgcctgtaattacatcccacaccttcaaa
actgtggctgatggacaacggttaattcacttccagttttttagccctgaccaggtgagg
gaagaattggatggggtcgataaaaaagaaagtatcggggatatgtggttgggtttaaac
gaggtttatcccaaaggaacggaaattttagttaatttggagttagacgagaaaaatagc
gctttgaaaatgacagccaccctgaaaaatgacccggcggaaagagtcagctgtacattt
tcgcggggtcgctcggatgagaaaatttatagagaattagaagtagcgatcgctgaactc
aataatcaagatttaactcaacttggcgtagaagaagcattgaagctagcagttccagta
gtcaaattagctaacagtatcatcgaccccaaaactgaggaagaacgcatcgataaacgt
gaagacgctcaagtaagcttgcagaaattccaagtttccatgtctaaggaagctttagac
gcggagtctctgatgaatgaatgcgatcgcatcgttcaaatctgcggttttctcattccc
ccaccacaaaaggaaagattacaaaagctgagtcaagatttgcaggggtcaattaatgcc
catgatctatcgagaatggaatcttacagcgaagatgctagacgggaactggatcatcta
ccaaatgaagtccaagtcattcaagctagtttgttagctatccgccaagcaaggcaagtt
gcacccaccaaagccagcgctatgtcggataaactctatcgtctactggaagcgatggaa
agtggcaatccacaagaaagcgatcgcttgtggcaagaactacagccagatgtcaaactt
tggctcaatcaggaattacctagcaatatgattgctacaggaatcagccgatga
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