Trichormus variabilis: Ava_1386
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Entry
Ava_1386 CDS
T00277
Name
(GenBank) Lipopolysaccharide biosynthesis
KO
K16554
polysaccharide biosynthesis transport protein [EC:
2.7.10.3
]
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ava01001
]
Ava_1386
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ava02000
]
Ava_1386
Enzymes [BR:
ava01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.3 bacterial tyrosine kinase
Ava_1386
Protein kinases [BR:
ava01001
]
Non-receptor tyrosine kinases
Bacterial
Ava_1386
Transporters [BR:
ava02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Ava_1386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_31
ParA
GNVR
Wzz
CbiA
CBP_BcsQ
MipZ
ArsA_ATPase
AAA_26
Fer4_NifH
T4SS_pilin
BCNT
Motif
Other DBs
NCBI-ProteinID:
ABA21010
UniProt:
Q3MDC6
LinkDB
All DBs
Position
complement(1707979..1710183)
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AA seq
734 aa
AA seq
DB search
MTMDSLQGFEEVDIHKYVEVLQRRWLAVVGIFGLSLTLGCVYAFSQKPSYKAEGSVMIKT
NRTSSLTGLPQDIGRLEPLNVNDNPLETQVRIIGSNPVLEQTIKALNLKDKNGKPLSIRI
FAKQLKIEGIKGTDVVQLSYKSNDPALAAKVVNKVIDNYIALNIKANQDEALTAKQVLIA
EIPKAETSVKKAESELRIFKEINKIIALEQEATVAVDTVSKLSNRISEAQAQLNDVTGRL
EQLRAQAQVDSQQGVIASELSQAPGVQKVLAELQETESKLAVERTRFESEHPAITSLEEK
IVVLKNLLKDRTGQVAGTAQVTQGSLQVGQLKQSIIADITRAESQRVGLERQISTLLQQR
EAYIKRANYLPKLEQNQRELERRLQAAQGTYETLLKKRQEIDIAQNQKIPNARVISYALI
PDFPEGPRKILFIIGGGVAGIFLGIIAAFSIDLIDRSVKTVKEAKEVLRYTVLGVIPTLG
RNTKDDIPIPGLDRAVPKIIGRDIPYFPLGDAYQILQVNLKFLCSDKPLKSIVVTSSVPK
EGKSEVSANLAVTMAQAGRRVLLVDADMRHPIQHHIWDLSNAIGLTNVLIGQVTLDEAVQ
EVMPNLEVLPCGILPPNPVAMLDSQRMATLMSNFARDYDFIIFDTPPLTGIADAAVLSTL
TDGILLVVRPGVVDFNSANAAKEFLTQSGQKVLGIVINGVNIKNEPNGYIYSSKYRQLEP
NSISSSLSKLSRKS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggactctttacaaggttttgaagaagtagatattcacaaatacgtagaagtt
cttcaacgacgttggttagctgtagtaggaatttttggactatcgctaacccttgggtgt
gtgtatgccttttcacaaaagccttcatacaaagcagaaggaagtgtgatgattaaaact
aatcgcacttcctcactcactggtttaccacaggacattggtcgcttagaaccattgaat
gtgaatgacaaccccttggaaactcaagtgagaattattggctcaaatccagtacttgag
caaacgattaaagcacttaaccttaaagataaaaatggcaaaccgctatcaattagaatt
tttgccaaacaactaaagatagaaggcatcaaaggcacagatgttgtgcagctttcttat
aagagtaatgatcctgcactagctgccaaagttgtcaataaagttattgacaattatata
gccttaaatattaaagccaatcaagacgaagcactcacagctaaacaagtcctgattgcg
gaaatacccaaagctgagacaagcgtcaaaaaagctgagtcagaactgcggatatttaaa
gaaatcaataaaattattgctctagaacaggaagcaaccgtagcggttgataccgtttcc
aaacttagcaaccgcatctctgaagcacaagcacaactaaacgacgttacgggtcgttta
gaacagttacgcgctcaagctcaggttgattcacaacaaggtgtcatcgcatccgaattg
agccaagcgccgggagtgcagaaagtactagcggaactccaagaaacagaaagtaaatta
gcggttgaacgtactcgctttgaatctgaacaccccgcaattactagcttagaagaaaag
attgtagttctgaaaaacttgctcaaagatcgcacaggacaagtagcaggtacagcgcag
gttacccagggaagcttacaggtcgggcaactgaagcaaagcatcatagcagatattact
cgtgcagagtcacaacgtgttggtttagaaagacaaatcagtacactcttgcaacaacga
gaggcatacattaaacgagccaactatttaccaaaactcgaacaaaatcaaagagagtta
gaacggaggctacaagcagcacaaggaacctacgaaaccctcctgaaaaaacgccaagaa
attgacattgctcaaaaccaaaagattcctaatgcgcgggtcatttcctatgccttaatt
cccgatttcccagaggggccccgcaaaattctatttattattggcggtggagtagctggt
attttcttaggtatcattgccgcctttagtatagacttgatcgatcgctcagtgaagact
gttaaggaagctaaagaagtcctgagatacaccgttttaggagttattcctacattaggt
agaaacactaaagatgatatacccataccaggacttgatagagctgttcccaaaatcatt
ggtagagatatcccctactttcccttaggtgacgcatatcagatactgcaagttaattta
aagttcctctgttctgataaaccactcaaaagtattgtagtcaccagttccgtccctaaa
gaaggcaagtcagaagtatcggcaaatttagctgtaactatggctcaggctggtcgtcgg
gtgttgttggtagatgcagatatgcgtcaccccatacaacatcatatttgggatctatct
aatgcgatcgggctaaccaacgtcctcattggtcaagtaactttagatgaagcagtacaa
gaagtaatgcccaatttagaggtacttccgtgcggaattttaccacctaatcctgtagcc
atgttagattctcaacgcatggccacattgatgagtaactttgctagggattacgacttt
attatctttgatacaccacccctaacaggcatagcggatgcggctgtattaagtaccctg
actgacggaattttattagttgttcgtccgggggtagttgattttaatagtgctaatgca
gctaaagagtttttaactcagtcaggtcaaaaggttttaggaatagtcatcaatggagtg
aatattaaaaacgaaccgaacggttacatttattcctcaaaatacagacaacttgaacca
aattccatatctagtagcttaagcaagttgtctagaaaaagttga
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