KEGG   Trichormus variabilis: Ava_1511
Entry
Ava_1511          CDS       T00277                                 
Name
(GenBank) Ribonuclease H
  KO
K03469  ribonuclease HI [EC:3.1.26.4]
Organism
ava  Trichormus variabilis
Pathway
ava03030  DNA replication
Brite
KEGG Orthology (KO) [BR:ava00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Ava_1511
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ava03032]
    Ava_1511
Enzymes [BR:ava01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     Ava_1511
DNA replication proteins [BR:ava03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RNase H
    Ava_1511
 Prokaryotic type
   Elongation factors (bacterial)
    RNase H
     Ava_1511
   Elongation factors (archaeal)
     Ava_1511
SSDB
Motif
Pfam: RNase_H RVT_3 COX6B
Other DBs
NCBI-ProteinID: ABA21134
CyanoBase: Ava_1511
UniProt: Q3MD02
LinkDB
Position
1859789..1860697
AA seq 302 aa
MSTQPIIESIYTDGACTGNPGPGGWGVVVYFSDGSVHEMGDAAKHTTNNKMEMQAAIAAL
KFLHDSGQTEPITLYTDSEYLINCVTKWVKGWKKKGWKKSDGNPVQNQDLLETLDELNSR
KVNWHHVRGHSGNIGNERCDVIARCFATGRMPSLQQLSTRHAHKSLPDISKINVVKVPDH
VTTSTIVHKTTQEISTSASNINTMEPSTAHVAATIEENPPEKRVEQLRNLVETLHIADEI
AAKGYLITSSELADLMDVHASAVTSRGDQWRWRNWIVSRVRREGNQILWELERGDRLGGE
DE
NT seq 909 nt   +upstreamnt  +downstreamnt
atgtctacccaaccgataattgaaagtatatacactgatggtgcttgcactggcaatcct
ggtcctggtggctggggtgtagttgtatattttagtgatggttcagttcacgaaatgggc
gatgctgccaagcataccaccaataataagatggagatgcaggcagcgatcgccgctctc
aaatttctccacgactctggacaaactgaacccattaccctctataccgatagtgagtat
ctaattaactgcgttaccaaatgggtaaaaggttggaaaaaaaagggctggaaaaaatct
gatggcaacccagttcagaatcaagaccttctagaaactttagatgaattaaatagccgt
aaggtaaattggcatcatgttcgcggtcattctggcaacatcggtaacgaacgttgtgat
gtgattgctcgctgttttgcaactggtagaatgccctctctacaacagttatccacccgt
catgctcataaatctttacctgacatcagtaaaataaatgtagttaaagtacctgatcat
gttacaacctctacaatagttcacaaaacgacacaagaaatcagtacttctgcgtcaaat
atcaacactatggaaccatctaccgcacacgttgcggctacaatcgaggaaaacccgccg
gaaaagcgggtggaacaactccgcaacttagtagaaactctgcatattgcagacgaaatt
gcggcgaagggttatttaatcaccagttctgagttggcagacttaatggatgtccacgcc
agtgctgttactagtaggggagatcagtggcgttggcgcaactggattgtttcacgggta
cgccgtgagggtaatcaaattctctgggaattagagcgaggcgatcgcttagggggtgaa
gatgaatga

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