Trichormus variabilis: Ava_1635
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Entry
Ava_1635 CDS
T00277
Name
(GenBank) Transposase, IS891/IS1136/IS1341
KO
K07496
putative transposase
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
Ava_1635
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Gene cluster
GFIT
Motif
Pfam:
Cas12f1-like_TNB
OrfB_IS605
Motif
Other DBs
NCBI-ProteinID:
ABA21258
UniProt:
Q3MCM8
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Position
2054516..2055727
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AA seq
403 aa
AA seq
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MVVLEFKAKGKTTQYAAINEAIKTAQFVRNKCIRFWMDNRSVGQKDLYRYNTALRAEYSF
VKDLNSHACQIGVERAYSSIARFYDNCKKGISGKKGYPKFKKNNRSVEYKTSGWKLSQTR
KQITFTDKKGIGKLNLKGTWDLNFYQLEQIKRLRLVRRADGYYVQFLVSVDNKVETQPTG
KTIALDVGLKEFYTDSNGHSEPNPRFYRTGETRLKFRQRCVARKHKGSINRQKAINKLGR
VHLKISRQREEHAKRVARCVIQSHDLVAYEDLRIKNLVKNHCLAKSINDAGWYQFRKWLE
YFGVKFGRITVAVNPAYTSQECSNCGAVVKKSLSTRTHVCECGFVLDRDWNAAINILKLA
LSTVGHTGTWVIDPNASGDSTSTHAGEILYEQVGSMNEESSPL
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggtagttctagagtttaaggctaaagggaaaacaactcaatatgcagctatcaacgaa
gcgataaaaactgctcaatttgtccgcaacaagtgtatccgtttttggatggataaccga
agtgtcggacagaaagatttatatcgctacaacactgcgttaagagctgaatactccttt
gtcaaagacttaaactctcatgcctgtcagataggagtagaaagagcctatagctctata
gctaggttctacgacaactgcaagaaaggcatttcggggaaaaagggatatcctaagttt
aagaaaaataaccgttcggtggaatataaaacctctgggtggaaactatctcaaacaaga
aaacagatcacctttaccgacaaaaaaggaattggcaagctgaatctcaaaggaacctgg
gatttaaacttctaccaattagaacagataaaacggttgaggttagtacgtcgtgcagac
gggtattatgtgcagtttttagttagtgtagacaacaaagtagaaacacaaccaactggt
aaaacaattgccttagatgttggcttaaaagaattctacacagacagtaatggacatagt
gaacctaacccaagattttatcgcacaggagaaacacgtctcaagtttcgacaaagatgt
gttgctcgtaaacacaaaggctctatcaaccgtcagaaggccattaataaattagggcga
gtacacctcaaaataagtagacaacgtgaagaacacgctaaaagagtagcgcgttgcgtt
atccagtctcacgacttggtagcctatgaagatttgaggattaagaatttagtgaaaaat
cactgtctcgctaaatctattaatgatgctggttggtatcaattcagaaaatggttggag
tatttcggggtgaagtttggcagaatcactgttgcggttaatcctgcttatacatcgcaa
gaatgctctaactgtggtgcagtagtcaaaaaatctctatcaacaagaactcatgtttgt
gaatgtggatttgtgctggatagagattggaatgctgctattaatattctgaaattagcc
ttgagtacggtagggcataccggaacttgggtcatagacccgaacgcttcaggagattcg
acctctactcatgctggagaaatcctgtatgagcaagttgggtctatgaatgaagaatct
tcgcccttatag
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