KEGG   Trichormus variabilis: Ava_1638
Entry
Ava_1638          CDS       T00277                                 
Name
(GenBank) ABC transporter-like protein
  KO
K06861  lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
Organism
ava  Trichormus variabilis
Pathway
ava02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:ava00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Ava_1638
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ava02000]
    Ava_1638
Enzymes [BR:ava01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.5  ABC-type lipopolysaccharide transporter
     Ava_1638
Transporters [BR:ava02000]
 ABC transporters, prokaryotic type
  ABC-2 type and other transporters
   Lipopolysaccharide transporter
    Ava_1638
 Other transporters
  Pores ion channels [TC:1]
   Ava_1638
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N AAA_23 SbcC_Walker_B
Other DBs
NCBI-ProteinID: ABA21261
UniProt: Q3MCM5
LinkDB
Position
complement(2060024..2060752)
AA seq 242 aa
MKIVLENIHKSYGKRVIVNRVNLSVAQGEIVGLLGPNGAGKTTTFYIATGLEKPNQGRVW
LDSLDITGLPMHKRARLGIGYLAQEASVFRQLSVQDNILLVFEQTNVPRWEWAKRLNTLL
REFRLEKVAKSKGIQLSGGERRRTELARALAAGGEGPKFLFLDEPFAGVDPIAVFEIQQI
VAQLRDRGMGILITDHNVRETLAITDRAYILREGQILAYGNADELYNNPLVRQYYLGDNF
QV
NT seq 729 nt   +upstreamnt  +downstreamnt
gtgaaaattgttttagaaaatattcacaagtcttacggcaagagagtaattgtcaatcgc
gttaatctttctgtcgctcagggtgaaatagttggtttactaggccccaatggggctggt
aaaacgacgacgttctacattgctacaggtttagaaaaacccaatcaggggcgagtttgg
ctagatagtttagatattactggcttacctatgcacaaaagggcaagattgggcattggc
tatttagctcaggaagcaagcgtttttcgccaactttcagtacaagataatattctcttg
gtgtttgagcaaactaatgtgccgcgttgggagtgggcaaaacgactcaacactttactg
cgggagttccgcttagaaaaagttgctaaaagtaaaggtatccaactatctgggggagaa
agacgacgaacggaattagcaagggctttagcggctgggggagaaggtccaaaatttcta
tttttggatgaaccctttgctggtgttgacccgatcgcagtcttcgagattcaacaaatt
gtcgcacaattacgcgatcgcggcatgggaatcttaattacagaccataatgttagagaa
accttagctatcaccgaccgcgcctatatcctccgtgaagggcaaattctggcctacggc
aatgctgatgaactgtacaataatccacttgtccgtcaatattacttaggtgataatttt
caggtttag

DBGET integrated database retrieval system