Trichormus variabilis: Ava_1748
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Entry
Ava_1748 CDS
T00277
Name
(GenBank) NnrU
KO
K15744
zeta-carotene isomerase [EC:
5.2.1.12
]
Organism
ava
Trichormus variabilis
Pathway
ava00906
Carotenoid biosynthesis
ava01100
Metabolic pathways
ava01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Ava_1748
Enzymes [BR:
ava01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.12 zeta-carotene isomerase
Ava_1748
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NnrU
PEMT
ICMT
Motif
Other DBs
NCBI-ProteinID:
ABA21370
UniProt:
Q3MCB6
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All DBs
Position
complement(2181521..2182237)
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AA seq
238 aa
AA seq
DB search
MMLNPWLTPSHFVMLGLQLTFAIAHSGGAALRPWAEKYIGPRLYRIFFALVSLPLAVILI
IYFFNHRYDGLQLWQVQNVPGVQAVVWVLSAISFLFLYPATFNLLEIAAIQKPQVHLYET
GIIRITRHPQMVGQVIWCIAHTLWLGTSFTLVTSFGLILHHLFGVWHGDRRLSKRYGEAF
EIVKQRTSIIPFAAIIDGRQSIKWEEFIRPAYLGVGIFVALLWWAHPLLFVATSRLNW
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgaatccttggttgactccgagtcattttgtcatgctggggttacaattaact
tttgcgatcgcccacagtggcggcgctgcgttacgaccttgggcagaaaagtacattggg
ccaaggctttatcgcattttttttgcattagtcagtctaccgttggctgtcatattgatt
atttacttctttaatcaccgttacgacgggttgcaactttggcaggtacagaatgtacca
ggagtacaggctgtagtttgggtattatcagctatttcatttttgtttttgtatcctgcc
accttcaatctactagaaattgcggctattcaaaagccccaagtacacttgtatgaaaca
ggaattattcggattacccgtcatccccaaatggtaggacaggtaatttggtgtattgcc
catactctatggttaggtacaagctttacccttgtgacttcttttgggctgattttgcac
catttatttggagtttggcatggcgatcgccgtttgagcaagcgttacggcgaagctttt
gaaattgtgaaacagcgcacctcaatcattccctttgccgcaattattgatggtcgtcaa
tctatcaagtgggaagaatttatccgccctgcatatttaggagttggtatttttgtcgct
ttactttggtgggcgcaccccctgttgtttgtagcaactagtaggttaaactggtag
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