Trichormus variabilis: Ava_1755
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Entry
Ava_1755 CDS
T00277
Name
(GenBank) Cobalamin (vitamin B12) biosynthesis CbiM protein
KO
K02007
cobalt/nickel transport system permease protein
Organism
ava
Trichormus variabilis
Pathway
ava02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ava_1755
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ava02000
]
Ava_1755
Transporters [BR:
ava02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Cobalt transporter
Ava_1755
Nickel transporter
Ava_1755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CbiM
PDGLE
DUF5989
Motif
Other DBs
NCBI-ProteinID:
ABA21377
UniProt:
Q3MCA9
LinkDB
All DBs
Position
complement(2188928..2189848)
Genome browser
AA seq
306 aa
AA seq
DB search
MHIPDGFVSVPVAGATGLVSLAGLLFASGRSQTAFGIRRAPILGLTTAFIFAAQMINFPV
AGGTSGHLLGGTLAAIVLGSPWAGSLCIATVLIIQAVLFADGGITALGANILNMAFIGVW
VGWMLTQTLQRLFGGSKARLPLAAGIAAAVSVVVAAIACAIELVLSGTASIAVVPAMTGI
HILIGIGEGLITGGVLTYLAKARPDLLPGEQQEFRGWLVPVVTIVLVAGALSLLASAWPD
GLERVAEDLGFIKLGEEVRISVPTPLADYGIEGLGAIGTSIAGLLGAAVCFAAAFGIAKV
VRPKNA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcatattcctgatggatttgtgtctgtgccagtcgcaggcgcaacgggtttggtaagt
ttggcgggactgttgtttgctagtgggcgatcgcaaacagcttttggtattcgtcgcgcc
cccattctcggtttaacgactgcttttatttttgctgcccaaatgattaatttcccagta
gcggggggaaccagtggtcacttgcttggcggtactttagccgcgattgttttaggtagc
ccttgggctggctcattgtgcattgccacagtcttaattatccaagccgtgctgtttgct
gatggtgggatcacagccttgggagccaatattctgaacatggcattcattggcgtttgg
gtaggctggatgttaacccaaactttgcaaagattatttggcggctctaaagcacgttta
cctttagcggctggtatagcggctgccgtgagtgtcgtagtagcagcgatcgcctgtgcg
attgagttagtcctttctgggactgcatccatagctgttgtacctgctatgacaggtatt
catattttaattggcattggtgaaggcttaattactggcggcgtattaacttatctagcc
aaagccagaccagatttgttaccaggagaacaacaagaatttcgcggttggttagtacct
gttgttaccatagtcttagtcgctggtgcattgtcattgctcgcctcagcttggcctgat
ggcttagaaagagtggcagaagacttaggatttatcaaactaggtgaagaagtcagaata
tctgtaccgacaccattagcagactatggtattgagggtttaggagcaattggaacaagt
atcgccggacttttgggggctgcggtgtgctttgctgctgcctttggaattgccaaagta
gtgagaccaaagaatgcttaa
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