Trichormus variabilis: Ava_1834
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Entry
Ava_1834 CDS
T00277
Name
(GenBank) GTP-binding protein, HSR1-related protein
KO
K03665
GTPase
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ava03009
]
Ava_1834
Ribosome biogenesis [BR:
ava03009
]
Prokaryotic type
GTPases
Ava_1834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP-bdg_N
GTP-bdg_M
MMR_HSR1
Dynamin_N
MMR_HSR1_Xtn
FeoB_N
AAA_16
RsgA_GTPase
Arf
ABC_tran
FlxA
AAA_29
Spc24
TniB
AAA_23
YwqH-like
Motif
Other DBs
NCBI-ProteinID:
ABA21456
UniProt:
Q3MC30
LinkDB
All DBs
Position
2280780..2282366
Genome browser
AA seq
528 aa
AA seq
DB search
MCAYVNRRGQVIRVGVGTPRQTQIPPMELPRYGAERLSGIRCIATHLKTEPPNEAALTAM
AMQRLDALVVINITGTGFTRRGGGATGYVKEAYLAHLVPQDARALIPSAAIAPLNNGQST
SWTISPPLDLDDLGQQDFIDLVEGLEAEFRREFIAEEVDADHDRVLIVGVMTDNMSLQQF
HDTLVELARLVDTAGGDVLQTVQQKRSRIHPQTVIGEGKVQEVALTAQTLGCNLVVFDRD
LSPSQIRNLEAQIGLRVVDRTEVILDIFAQRAQSRAGKLQVELAQLEYMLPRLTGRGQAM
SRLGGGIGTRGPGETKLETERRAIQKRISRLQQEVDQLQAHRSRLRQRRQHREVPSVALV
GYTNAGKSTLLNALTNAEVYTADQLFATLDPTTRRLVIPHAETGEPQGILITDTVGFIHE
LPASLMDAFRATLEEVTEADALLHLVDLSHPAWLSHIRAVREILAQMPVTPGPALVAFNK
IDQVDSTTLALAQEEFPLAVFISASQRLGLETLRLRLSLLIQYAVDSQ
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
gtgtgtgcctatgtcaaccgtcgcggacaagtgattcgtgttggtgtaggcacaccacgt
caaacgcaaattccgccaatggaattgccgcgttatggtgcagaacgtctgagtggtatt
cgttgcattgctacccatcttaagacagaaccgcccaatgaagcggcgctgacggcgatg
gcaatgcagcgtttagatgccttagtagtgataaatattaccgggactggctttacacga
cgcggtggtggagccacaggatacgttaaagaagcatacttagcgcacctagtccctcaa
gatgcccgtgctttgattcctagtgcagcgatcgcaccattaaataatggtcaatctacc
agttggactatatcaccaccattggacttagatgatctcggacagcaagatttcatcgac
ttggtggaagggctagaagcagagttccgtcgggagttcatcgccgaggaagtagacgct
gatcatgaccgtgtattgatcgtgggtgtcatgaccgataatatgtcactccaacaattc
cacgataccttggtggaattggcacggttagtagatacagccggtggagatgtattacag
acagtgcaacaaaagcgatcgcgcattcatcctcaaaccgtcattggtgaaggtaaagtc
caagaagttgccctcacagcccaaacattgggatgtaacctcgtcgtttttgaccgcgac
ctctcaccctcccaaatccgcaacttagaagcacaaattggtctccgcgtcgttgaccgc
accgaagttatcttagatatctttgctcaacgcgcccaatctcgcgccggtaaattacaa
gttgaactggcgcaactagaatatatgctgcccagactcaccggcagaggtcaagcaatg
tctcgactagggggtggtattgggactcgtggtcctggtgaaaccaaactagaaaccgaa
cgccgggccattcaaaaacgtatttctcgactgcaacaagaagttgaccaattacaagcc
caccgttcacggttaagacaacggcgacaacatcgggaagttccttcagtagctttagtt
ggttataccaacgctggtaaatccaccttattaaatgccttgaccaatgctgaagtttac
accgcagaccagttattcgccacccttgaccccaccacgcgccgcctagttattccccat
gcagaaactggagaaccccaaggaattctgattacagacacagtagggtttatccacgaa
ttacctgcatcattaatggatgctttccgcgccaccttggaagaagtaacagaagccgat
gccttactacacctagtagatttatctcatcctgcgtggttgagtcacattcgcgcagtc
cgggaaatattggcacaaatgccagttactcccggcccagccttggttgcttttaacaaa
atcgaccaagtcgatagcaccactctagctttagcccaagaagagtttcctttagccgta
tttatttctgccagtcaacgtttggggttagagaccttgcgtctgcggctaagtctccta
attcaatatgctgttgactctcagtaa
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