Trichormus variabilis: Ava_1877
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Entry
Ava_1877 CDS
T00277
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ava03400
]
Ava_1877
DNA repair and recombination proteins [BR:
ava03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ava_1877
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_16
AAA_22
nSTAND3
Lon_C
NTPase_1
GvpD_P-loop
NACHT
DZR
AAA_14
ABC_tran
ATPase_2
MCM
AAA
AAA_24
AAA_5
DUF7125
ATP-synt_ab
SLFN-g3_helicase
zf-RING_10
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ABA21499
UniProt:
Q3MBY7
LinkDB
All DBs
Position
complement(2328872..2330395)
Genome browser
AA seq
507 aa
AA seq
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MAKPKTFYICNECGAESPQWFGKCPACGTYNSLEEQITIQSSVDVLKGGVSGWHASQNNG
KAPVKPAKPRASLTFDQITDRQIARWESGYGELDRVLGGGVVPGSMVLIGGDPGIGKSTL
LLQVSNQLAQRYRILYVTGEESGQQVKLRASRLGVAKTLSVVGDDQREESEQTPLVSIAD
GVGADLYVLPETDLEEILREVDSLKPNVAVIDSIQTVFFPALTSAPGSVAQVRECTAALM
KVAKHEDITMLIVGHVTKEGAIAGPKVLEHLVDTVLYFEGDRFASHRLLRTVKNRFGATH
EIGIFEMVQNGLREVPNPSELFLGNRDDPAPGTAIVVACEGTRPIVVELQALVSPTSYPS
PRRAGTGIDYNRLVQILAVLEKRVGIPMSKLDSYVASAGGLNVEEPAVDLGIAIAIVASF
RDRIVDPGTVLIGEVGLGGQVRSVSQMELRLKEAAKLGFKKAIVPKGQKFPDFDIEIIPV
AKVIDAIIAAIPHQELTEEDFNLDEDQ
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcccaaaaccttttacatttgtaacgaatgtggagcagaatctccccaatgg
tttggtaagtgtccagcttgtggtacttacaattccttagaagaacagattaccattcaa
tcttccgtagatgtacttaagggaggagttagtggttggcacgcatcccagaataatggt
aaagcacctgttaagccggcaaaaccacgagcttctttaacatttgaccaaattaccgat
cgccaaatcgctcgttgggagtctggctatggagaactggatcgggtgcttggtggtggt
gtggttccaggttcgatggttttgattggtggtgatcccggtattggtaaatctacccta
ttactacaagtctcaaatcaattggcgcagagatatcgtattctctatgtcacgggtgaa
gaatctgggcaacaagtaaaattaagagcttctcgcttaggtgtggcaaaaaccctgagt
gttgtcggagatgatcaaagggaggaatcagaacagacacctctagtatctatagctgat
ggtgtgggcgcagatttatatgttttgccagaaacagatttagaagagatattacgagag
gtggattctctcaagcccaatgtggcggtaattgacagtattcaaaccgtgttttttcca
gccctgacctctgcgcctggttctgtcgcccaagtcagggaatgtacagcagccctaatg
aaagtggcaaaacatgaagacattaccatgttaattgtcggacacgtcaccaaagaaggg
gcgatcgccgggccgaaagttttagaacacttagtagatacagtactctattttgaaggc
gatcgctttgcttcccatcggttattacgcacagtgaaaaaccgctttggtgcaacgcac
gaaatcggcatctttgaaatggtgcaaaacggactacgtgaagtccctaaccctagtgag
ttatttttaggtaaccgtgatgaccccgcaccaggtacagccattgtcgtagcttgtgaa
ggtacacgacctatagttgttgagttacaagctttagttagccccaccagctacccctct
ccccgccgagccggaactggtatagattataaccgattagtccaaattcttgccgtgtta
gaaaaacgggtaggaattcctatgtccaaattagattcttacgtcgcctcagctggagga
ttgaatgtagaagaaccagccgtagatttaggaatcgccattgccatcgttgccagtttc
cgcgatcgcatcgttgatcctggtacagtcttgattggcgaagtcggcttaggtggacaa
gtgcgatcggtttcccagatggaactccggttaaaagaagcagctaaactgggattcaag
aaagcgatcgttcctaaagggcaaaaatttcccgactttgacattgaaatcatcccagtt
gccaaagtcatagatgcaattatcgccgccatccctcaccaagaactaacagaagaggac
ttcaacctagacgaagatcaatag
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