Trichormus variabilis: Ava_1933
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Entry
Ava_1933 CDS
T00277
Name
(GenBank) transcriptional regulator, GntR family
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ava03000
]
Ava_1933
Transcription factors [BR:
ava03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Ava_1933
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Fe_dep_repress
HTH_50
HTH_11
HTH_36
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
ABA21555
UniProt:
Q3MBT1
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Position
complement(2402391..2403863)
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AA seq
490 aa
AA seq
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MDFAINIDPDAPLPLHRQVYEELRRAILLGRLISGEKLPSTRSLAQLLGVSRATVTQGYE
LLLSEGYLETIVGSGTFVCRQLPDELLNTAPIESKLQPNNSPVPLSAYGKSLSDKAFLCI
PEQAVEISFSYGRPAFDKFPIDLWRKLISRHCQLKPNVLDYTDNSLGYQPLREAIAAYLS
RSRAVNCQAEQIIIVGGSQQGLDLITRILIDRGDGIVVEEPGYLGARRAFLAQGASLFPV
PVDQSGLIVNKLKTSIIPNLKLVYVTPSHQFPTGAVLSLPRRLELLAWAQKAGVMIIEDD
YDSEYRYGERPIPALQGLDQGNSVIYVGTFSKVLFPALRLGYLVLPQNLVNIFARAKWLA
DRQCSLLEQYALTDFITEGHLERHIRKMRSLYNQRRQTLVQSLFSHFGNRAKILGENAGM
HLMVKIDTQISDDEIVQSAALSGVSIGAAYPQYLKDSPGSEFIFGYAELNEQQIQEGVRR
LARVIHNSEG
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggattttgctattaatatcgacccagacgcacctttacctctgcatcgccaagtttat
gaggaattacgtcgggctattttgttaggacggttaatttcaggggaaaaactaccatct
acgcgatcgcttgctcaattacttggtgtttctcgtgctactgtgactcaaggttatgag
ttattgctgagtgaaggttatctagaaactattgtgggttcggggacgtttgtttgtcgt
caacttcccgatgaattactgaatactgcaccaattgagtcaaaattacaaccaaataac
tcacctgtgcctttatcagcttatggtaaaagtttgagtgataaagcgtttttatgtata
ccagaacaagcggtagaaattagctttagttatggacgaccagcttttgataagttcccg
atagatttatggcgtaagttaatctcgcgtcattgccaacttaaaccaaatgtgcttgac
tatacagataattccctgggatatcaaccattaagggaggcgatcgctgcttatctttcg
cgctccagagccgttaattgtcaggcagaacaaatcattattgttggtggttctcagcaa
ggtcttgatttaattacacgtatcttaattgaccgtggtgatggaattgttgtagaagaa
ccgggttatttaggtgctagacgagcttttttagctcagggggctagtctatttcctgtt
cctgtggatcaatcagggctaatagtcaataagttgaaaacaagtataattcctaacctt
aaactagtttatgtcactccctcccatcaatttcctacaggtgcggtgttatctcttccc
cgcagattagagttactggcttgggcgcagaaagcaggggtgatgattattgaagatgac
tatgatagtgagtaccgttatggtgagcgtcccataccagctttacaaggattagatcag
ggtaactcagttatttatgtaggtacattttctaaagtcctttttcccgccttgcgcttg
ggttatttagttttaccccagaatttagtaaatatatttgcccgtgcaaaatggctggca
gataggcaatgtagtttactagaacagtatgccctgactgattttattacagaaggacat
ctggaacgacatataagaaagatgcgatcgctctacaaccaacgtaggcaaactttagta
cagtctttgttttctcattttggcaatagggcaaaaattctgggagaaaatgcaggaatg
cacctcatggtaaaaatagatactcaaatcagcgatgatgaaatagtccaaagtgcagct
ctttccggtgtcagtatcggggcagcgtatccccagtatttaaaagatagccctggtagt
gaatttatctttggctatgcagaactcaatgaacagcaaattcaagaaggggtacggcga
ctggctagggtaattcataattcagaaggctaa
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