Trichormus variabilis: Ava_1963
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Entry
Ava_1963 CDS
T00277
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ava
Trichormus variabilis
Pathway
ava03030
DNA replication
ava03430
Mismatch repair
ava03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ava_1963
03430 Mismatch repair
Ava_1963
03440 Homologous recombination
Ava_1963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ava03032
]
Ava_1963
03400 DNA repair and recombination proteins [BR:
ava03400
]
Ava_1963
Enzymes [BR:
ava01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ava_1963
DNA replication proteins [BR:
ava03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ava_1963
DNA repair and recombination proteins [BR:
ava03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ava_1963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_22
AAA_16
UspB
Motif
Other DBs
NCBI-ProteinID:
ABA21585
UniProt:
Q3MBQ1
LinkDB
All DBs
Position
2440029..2440991
Genome browser
AA seq
320 aa
AA seq
DB search
MTNNPFAPLVGQKQAIELLTQAVKQNRVAPAYLFAGPDGVGRSLAARCFVELLFASVVEA
RLLPSLQQRLRQGNHPDLLWVQPTYQYQGQRFTAAQAAEKKLKRKAPPLIRLEQIREITE
FLSRPPLEAPRNVVVLEEAQTMAEPAANALLKTLEEPGQATIVLITPSPESVLPTLVSRC
QRIPFYSLDTTSLTQVLTQTGNQAVLQHPALLSLASGSPGSAIASYEQLQTIPPDLLQDL
TTAPKSQRHALELAKRIDKDLETEAQLWLVDYLQQSYWQKRHLPGIISQLEKARKYLLVY
AQPRLVWECTLLSVYQEFNI
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaccaataacccgtttgcaccactggtaggacaaaagcaagctattgagttattaact
caagctgttaagcaaaaccgagtagccccggcttatctatttgcggggccagatggtgta
ggacggagtttagcggcgcgttgctttgtagagttgttatttgcatctgttgtggaagcg
cgacttcttccatctttacaacagcgtttacgtcaaggtaatcaccctgatttactgtgg
gtacagccaacttatcaataccaagggcaaagattcaccgccgcccaagcagcagaaaag
aaactcaaacgcaaagcaccgcctttaattcgcctagaacaaattcgagaaattacagaa
tttctcagccgtcctcccttagaagcaccaagaaatgtggtggtgttggaggaagcgcaa
acaatggcggaaccagccgcaaatgctttgttgaagacgttagaagaaccaggacaagca
accatagttttgattacgccttcccctgagtctgtattgccgactttggtgtcacgctgt
caacgcattcccttttacagtttagatacaacatctttgactcaagtacttacgcaaacc
gggaatcaagcagttttacagcacccagccctgttgagtttagcatctggtagcccaggg
agtgcgatcgcctcttatgaacaattacaaactattccccctgacttactgcaagattta
acaacagcaccaaaatctcaacgtcacgcgttggaattagctaagagaatcgacaaggat
ttagaaacggaagcacaactatggttagtggattatttacagcaatcctactggcaaaag
cggcatctaccagggattatcagtcaactagaaaaagctcgtaaatacctactggtctac
gctcaaccgcgcctcgtttgggaatgtactttattatctgtatatcaggaatttaatatc
taa
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