Trichormus variabilis: Ava_1987
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Entry
Ava_1987 CDS
T00277
Name
(GenBank) Protein of unknown function UPF0011
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ava03009
]
Ava_1987
Enzymes [BR:
ava01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
Ava_1987
Ribosome biogenesis [BR:
ava03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Ava_1987
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
UPF0181
CRR7
ABC_trans_aux
Motif
Other DBs
NCBI-ProteinID:
ABA21609
UniProt:
Q3MBM7
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All DBs
Position
2467743..2468600
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AA seq
285 aa
AA seq
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MQTEPKPGALYIVGTPIGNLEDITFRAVRILQNVDLIAAEDTRHTGKLLQHLQVKTPQVS
YHEHNRSSRIPELLEHLHSGKAIALVSDAGMPGISDPGYELVKACVEVAIPVVPIPGASA
AITALSAAGLPTDKFVFEGFLPAKGQQRREHLEALQTESRTLIFYESPHRLRETLQDLAE
VWGSDRQIVLARELTKLYEEFWRGSIEEAIAHYQQKEPQGEYTLLVAGNPPSQTLLTEEQ
LKAELQQLISQGISRSQASRQLAKYTSLNRRQVYQIALSIVMNPE
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcagactgaacccaaaccaggcgcactatatatagttggtacaccgattggtaatttg
gaggatatcacctttcgggcggtgcggatattgcaaaatgtggatttgattgcggcggaa
gatacgcgccacacagggaaattactccaacatttgcaagtaaaaacaccacaagttagt
taccatgagcataatcgtagtagtcgcatcccagaattattagagcatttgcatagtggt
aaagcgatcgctctagtcagtgatgcaggtatgccgggaatttctgatcctggttatgaa
ctggtgaaagcctgtgttgaggtagccattccagtagttcccattcctggtgcgagtgcg
gcaattacagccttgagtgcggcgggactaccaacagataagtttgtatttgagggtttt
ttgccagctaaaggtcaacaaagacgagaacatttagaggctttacaaacagaatcccgt
actttaattttctacgaatcgccccaccgtctgcgggaaactttacaagatttagcagag
gtttggggaagcgatcgccaaatagtcctggcaagggagttgactaaattatatgaggaa
ttttggcgagggagtattgaggaagcgatcgcccattatcaacaaaaggaaccccaaggt
gaatatacgcttttggtagcgggaaacccacccagccaaaccctattaacagaagaacaa
ctcaaagctgaattacaacaattaatcagtcaaggaatatcgcgatcgcaagctagccgt
caactagcaaaatacacttccctcaaccgtcgccaagtctatcaaattgctctttctata
gttatgaatcctgaatag
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