Trichormus variabilis: Ava_2017
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Entry
Ava_2017 CDS
T00277
Name
(GenBank) pullulanase / isoamylase
KO
K01208
cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:
3.2.1.54
3.2.1.133
3.2.1.135
]
Organism
ava
Trichormus variabilis
Pathway
ava00500
Starch and sucrose metabolism
ava01100
Metabolic pathways
ava01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Ava_2017
Enzymes [BR:
ava01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.54 cyclomaltodextrinase
Ava_2017
3.2.1.133 glucan 1,4-alpha-maltohydrolase
Ava_2017
3.2.1.135 neopullulanase
Ava_2017
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Alpha-amylase_C_2
DUF3459
Neopullulanase-like_C
Malt_amylase_C
DUF5696
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
ABA21639
UniProt:
Q3MBJ7
LinkDB
All DBs
Position
complement(2496824..2498290)
Genome browser
AA seq
488 aa
AA seq
DB search
MQIQTPDWVKNAVFYQIFPDRFAISKQSRKRLLRDVRWEDWDAMPTLQGYKGGDLWGIME
QLDYIQDLGIDAIYFTPIFQSASNHRYHTHDYYQVDPMLGGNAAFKELLDAAHERNIKVV
LDGVFNHSSRGFFFFHDVLENGPHSPWVNWFKIEGWPLAPYTGELPANYVGWADNRALPV
FNHDNPDVREYIMEIAEYWLKFGIDGWRLDVPFEIKTPGFWQEFRDRVKAINPEAYIVGE
VWGDSREWLDGTQFDGVMNYLFAGPTIAFTAGDRVVLEQVQSRDYQPYPPLFAAEYATKI
QEVLQLYPWEIQLTQLNLLASHDTARLMTIAGGDQASIELATLLLLTFPGAPSIYYGDEV
GLPGGIDPDSRRGFPLEANWDREIYQTHRQLIALRHAYPALRTGEYQVIWAQGALYVFAR
TLGKEELIIAVNVGTAPAQANVDVASLQTQPDKILYGEAEFSWHNTEETKQLSLNLPPRS
GCILGLGD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattcaaacaccagactgggtgaaaaacgctgtattctaccaaatctttccagac
cgttttgctataagtaaacagtcccggaagcggctgttgcgtgatgtgcgttgggaagac
tgggacgcaatgccaacactgcaaggatacaaaggcggtgatttatggggcattatggag
cagttggactatattcaagatttgggcatcgatgccatctactttacgcccatctttcag
tctgccagcaatcaccgctatcatacccacgactattatcaagtagacccgatgttgggt
gggaatgccgcttttaaggagttactagacgcggcccacgaacgcaatattaaagttgtc
ctcgatggcgtatttaatcattccagtcgaggatttttctttttccatgacgttttggaa
aatggcccccattctccttgggtaaattggttcaaaatagaaggctggcctcttgcacca
tatacaggtgagttaccggcaaattacgtaggttgggctgataatcgtgccttgcccgta
tttaatcacgataacccagacgtacgggaatatattatggaaattgccgaatattggctt
aaattcggcatcgacggctggcgattggatgtaccatttgaaattaaaactcctggcttt
tggcaagaattccgcgatcgcgttaaagccattaaccccgaagcttatattgtgggggaa
gtgtggggagattcccgtgagtggctagatgggacgcaattcgacggcgtgatgaattac
ttatttgccgggccgaccattgcttttaccgcaggcgatcgcgtagtcttagaacaagtc
caaagccgcgactatcaaccgtatccgcccctattcgccgccgaatacgccaccaaaatt
caggaagtactgcaactttatccttgggaaattcaacttacccaactcaacttattagcc
agtcacgatacagccagactaatgaccattgctggcggtgatcaagccagtatagaatta
gctaccctattactacttacctttcctggtgcgccgagtatctactacggtgatgaagtg
ggtttaccgggaggtatagaccccgattctcgccggggttttcccttagaagccaactgg
gatagagaaatttaccagactcaccgtcaattaatagccttacgccacgcttacccagcc
ttacgcacaggtgagtatcaagttatttgggcgcaaggtgcattgtatgtatttgcccgt
actttaggtaaggaagaactgattattgctgtaaatgtaggtacagcaccagcccaggct
aatgtagatgttgctagtttgcagactcagccagataaaatcctgtatggcgaagcagaa
tttagctggcacaatacagaagaaacaaaacaactttccttaaatctccccccacgtagt
ggctgcattttgggtttaggggattag
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